UFO09805.5prime Sequence
1081 bp (983 high quality bases) assembled on 2011-10-17
> UFO09805.5prime
CAGTCGACATGAGCGCAGAGAAGTCCGATAAGGCCAAGATCAGTGCCCAA
ATCAAGCACGTGCCGAAGGACGCGCAGGTGATCATGTCCATCCTGAAGGA
GCTGAATGTCCAGGAGTACGAGCCGCGCGTGGTCAACCAACTGCTGGAGT
TCACCTTCCGCTATGTAACCTGCATTCTGGACGACGCCAAGGTGTACGCC
AACCATGCGCGCAAGAAGACCATCGACTTGGACGACGTGCGTCTGGCCAC
CGAGGTTACGCTGGACAAGAGCTTCACCGGGCCGTTGGAGCGCCACGTTC
TAGCCAAGGTGGCCGACGTGCGCAACAGCATGCCCCTGCCACCCATTAAG
CCGCACTGCGGTCTCCGACTGCCGCCCGACCGCTACTGTCTCACCGGCGT
CAACTACAAACTGCGGGCCACTAATCAGCCCAAGAAAATGACCAAGTCGG
CGGTGGAGGGCCGTCCACTGAAGACCGTCGTTAAGCCCGTCTCCAGCGCC
AATGGTCCGAAGAGGCCACACTCCGTGGTGGCCAAGCAGCAGGTGGTGAC
CATTCCCAAGCCCGTCATCAAGTTTACCACCACTACGACAACGAAAACGG
TGGGCAGCTCCGGCGGATCTGGGGGCGGCGGTGGTCAGGAGGTTAAGAGC
GAGAGCACCGGCGCCGGCGGAGATCTCAAGATGGAGGTGGACAGCGATGC
GGCGGCCGTGGGCAGCATCGCTGGCGCATCCGGTTCGGGAGCAGAAGTGC
CAGCGGAGGAGGAGGAGGAGGAGGATCATCTGGCGTTGGAGTGGCCGTCA
AGCGGGAACGTGAGGAGGAGGAGTTTGAGTTTGTGACCAACGCAAGCTTT
TCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATA
ATCATAATCATAATTCATAATCACACTAGCCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCCACCATAAAAAACGCCCGGCGGCACCGAGCGT
TCTGAACAATCCAGATGGGAGTTCTGAGTTCATTACTGATCTTATCAAAG
GAGTCAGGCAGCTCGATATCAATACGCCCGG
UFO09805.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:16:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| e(y)1-RA | 1124 | CG6474-RA | 99..932 | 9..841 | 4145 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:16:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17842474..17843156 | 160..841 | 3365 | 99.9 | Plus |
| X | 23542271 | X | 17842259..17842410 | 9..160 | 760 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:16:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Doc4-element | 2791 | Doc4-element DOC4 2791bp | 1457..1487 | 791..761 | 110 | 83.9 | Minus |
UFO09805.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:37:43 Download gff for
UFO09805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 79..922 | 2..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:16:42 Download gff for
UFO09805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 93..936 | 2..847 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:02:59 Download gff for
UFO09805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| e(y)1-RA | 93..936 | 2..847 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:02:59 Download gff for
UFO09805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17842253..17842409 | 2..159 | 97 | -> | Plus |
| X | 17842474..17843160 | 160..847 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:16:42 Download gff for
UFO09805.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17736286..17736442 | 2..159 | 97 | -> | Plus |
| arm_X | 17736507..17737193 | 160..847 | 99 | == | Plus |
