UFO09811.5prime Sequence
1092 bp (1012 high quality bases) assembled on 2011-10-17
> UFO09811.5prime
CAGTCGACATGGGCTCGAACACTGGAGCTTGGATTCTACTGGGCCTGCTG
GCCGGCATCGCCTCTCTGTCTAGCGCTGCGAATATACAGCGAAATGAGGA
CCAGACGATTCTTCAGAACAATGGAAACACCTTCCTATCAAACGGAGCCG
GGCAAATCATTCGTGGACCCGATGGCAAAACAGTATTGATCGGATCCGAT
GGGCGCAGGATCATCACGGATGCCGACTCCAGCGAAGAGGACAGCTCGCA
CGATTATGGTCACGGTGGGAGCTATAACAATGTTATCATCAATGGTGGCT
CGGGATCCAGCGTAATTCATGGCGATGGACATAGCTTCATTGTTGGAGAT
GCGAGTCATGGAAGTTACATGAACAGCAATGGACGCAGTATTAGGATCAT
AAATGGTGCCATCGAACTCAATGATCACGGCCAGGTGTACACATTCAGGC
CAAAAGCAGCAGGCATTAACGAAAAGGAAACCGTCACCATCAACGGACAA
CCGGCTCAGGTGGAGTACTCCAATGGTGATATAGTCATCGAACTGGCCGA
TCATACGGTGATTGCCAAGATAGGTGGACGCACATTTCTGGGCGATCGCG
AATCCTTCGACAATCGGGATAAATTAGAGGCGGAGGCAAAGAACTATGCC
GATCGTATCCAGCAAGAGGTGCACGCCAATCTCCAGAAAACCATGGCTGA
TATTCAAAGGGATCTTCAGAATTCCCTGGGAAATATTTTCTATGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGGTCAT
GACTAGTGCTTGGGATTCTCACAATAAAAAAACGCCCGGCGGCAACCGAG
CGTTCTGAACAAATCCAGATGGGAGTTCTGGAGGTCATTACTGGATCTAT
CACAGGAGTCCAAGCGAGCTCGATATCAATTACGCCCCGGCCCTGCCACT
CATCGCAGTACTGGTGGTAATTCATTAAGCCATTTCTTGGCGAACTGGGA
GCCATCCAAAACGGCAGGATGAACCTGATTCGTAGCGGCATC
UFO09811.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:16:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18067-RB | 1530 | CG18067-RB | 282..1016 | 9..743 | 3675 | 100 | Plus |
| CG18067-RA | 808 | CG18067-RA | 18..752 | 9..743 | 3675 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:16:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20534653..20535321 | 75..743 | 3345 | 100 | Plus |
| 2R | 25286936 | 2R | 20534526..20534592 | 9..75 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:16:55 has no hits.
UFO09811.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:37:46 Download gff for
UFO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 8..758 | 1..749 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:01 Download gff for
UFO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 6..756 | 1..749 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:07 Download gff for
UFO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18067-RA | 9..759 | 1..749 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:07 Download gff for
UFO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20534517..20534592 | 1..75 | 94 | -> | Plus |
| 2R | 20534654..20535328 | 76..749 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:01 Download gff for
UFO09811.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16422022..16422097 | 1..75 | 94 | -> | Plus |
| arm_2R | 16422159..16422833 | 76..749 | 99 | | Plus |
