UFO09818.5prime Sequence
1114 bp (970 high quality bases) assembled on 2011-10-17
> UFO09818.5prime
CAGTCGACATGGGAGGCTGTTGCTCAAAGGATTTGGATGACAAACGCTCG
TGGAGTCCCGAGGAGACCAAGAATGGCAGCACCACATCAACAATCATTGC
CCAGCCGCTGGATGAGGTGGGCACCACCGGTGTCTTCACATTGACACGCA
CCACCACTAGCACCACGCGGCAGGAGAAGACGGTGACCACCACCAGCGAG
GAGCAGGAGCAGGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACT
AGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAA
AACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAAT
TACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCAT
TCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCA
GCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAA
ACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGT
GAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACC
CTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAA
TATATGTGTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGA
TGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACAC
TATCCCATATCACCAGCTCACCGTTCTTTTCATTGCCATACGAAAATTCC
CGGATGGAGCATTCATCAGGCGGGCAGGATGTGATTAACGCCCGGAAAAA
ACTTGTGCTTATTTTTTCTTTACGGTCTTTAAAAAGGCCGTTATATCCAG
CTGACCGGTCTGGTTAATAGGGTAATTGGAGCACTGAACTGAATGCCTCA
AATGTTCTTTACGATGCCATGGGATAATTCAACCGGTGTATATCAGGATT
TTTTCTCATTAAGC
UFO09818.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:18:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15210-RA | 609 | CG15210-RA | 158..364 | 9..215 | 1035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:18:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10839513..10839650 | 78..215 | 690 | 100 | Plus |
| X | 23542271 | X | 10839387..10839455 | 9..77 | 345 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 784..851 | 123 | 68.1 | Plus |
UFO09818.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:37:51 Download gff for
UFO09818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15210-RA | 152..369 | 1..222 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:36 Download gff for
UFO09818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15210-RA | 152..369 | 1..222 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:29 Download gff for
UFO09818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15210-RA | 152..369 | 1..222 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:29 Download gff for
UFO09818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10839381..10839455 | 1..77 | 94 | -> | Plus |
| X | 10839513..10839650 | 78..215 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:36 Download gff for
UFO09818.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10733414..10733488 | 1..77 | 94 | -> | Plus |
| arm_X | 10733546..10733683 | 78..215 | 100 | == | Plus |
