UFO09822.5prime Sequence
1119 bp (1020 high quality bases) assembled on 2011-10-17
> UFO09822.5prime
CAGTCGACATGGCAAAGACGATTCTTCATCTGTTTATCGGCGGGATTCTC
CTGGTAAATCTGAGCTTAGGAGCCACTGTAAGGCGCCCACGCCTGGATGG
ACGCATTGTGGGCGGCCAGGTGGCTAACATAAAGGACATTCCCTATCAGG
TTTCCCTGCAGCGTAGCTATCACTTCTGTGGTGGCTCTTTAATCGCTCAG
GGTTGGGTGCTCACAGCTGCCCACTGCACTGAAGGATCTGCGATACTCTT
ATCCAAAGTTCGTATTGGCTCCTCGCGGACTTCTGTGGGCGGTCAATTGG
TGGGGATCAAGCGAGTTCATCGACATCCCAAATTCGATGCCTACACCATT
GACTTTGACTTTTCGCTGCTCGAACTGGAGGAATATAGTGCCAAGAACGT
GACGCAGGCTTTCGTTGGGCTTCCCGAACAGGATGCGGACATTGCCGATG
GTACACCGGTCCTGGTTTCCGGCTGGGGAAACACGCAGAGCGCCCAGGAG
ACCTCAGCCGTTCTGCGGTCCGTTACGGTGCCCAAAGTCAGTCAGACGCA
GTGCACAGAGGCTTATGGCAACTTTGGCAGCATCACGGATCGCATGCTCT
GCGCCGGATTGCCGGAGGGCGGCAAGGACGCCTGCCAAGGTGACTCCGGA
GGACCTCTCGCTGCTGATGGTGTCCTTTGGGGCGTGGTCTCCTGGGGCTA
CGGTTGTGCTAGACCAAACTATCCCGGCGTTTATTCGCGAGTCTCTGCGG
TTCGTGACTGGATTAGCTCTGTTAGTGGCATTGCAAGCTTTCTAGACCAT
TCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCA
TAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTG
ATTCTCACAATAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAATCCA
GATGGAGTTCTGAGGTCATTACTGGATCTTTTCACAGGAGTCAAGGGGAG
CTCGATATCAAATTACGCCCCCGCCTGCCACTCATCGCAGTACTGTTGTA
ATTCATTAGCAATTCTGCGAACATGAAGCATCACAAGCGCATGATGACTG
ATCGCAAGCGGCATCAGAC
UFO09822.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:17:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Try29F-RD | 1280 | CG9564-RD | 101..875 | 8..782 | 3875 | 100 | Plus |
| Try29F-RC | 932 | CG9564-RC | 101..875 | 8..782 | 3875 | 100 | Plus |
| etaTry-RA | 911 | CG12386-RA | 590..656 | 592..658 | 200 | 86.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:17:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8998637..8999411 | 8..782 | 3875 | 100 | Plus |
| 2R | 25286936 | 2R | 11340768..11340834 | 658..592 | 200 | 86.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:17:14 has no hits.
UFO09822.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:37:47 Download gff for
UFO09822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Try29F-RC | 95..875 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:17:11 Download gff for
UFO09822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Try29F-RC | 95..875 | 1..782 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:14 Download gff for
UFO09822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Try29F-RC | 95..875 | 1..782 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:14 Download gff for
UFO09822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8998631..8999411 | 1..782 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:17:11 Download gff for
UFO09822.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8998631..8999411 | 1..782 | 99 | == | Plus |
