UFO09852.5prime Sequence
1092 bp (995 high quality bases) assembled on 2011-10-17
> UFO09852.5prime
CAGTCGACATGAAGAGCCTGACGTTATTGGCGCTTTTGATCTTGGCCACG
TTGGCCTTTGTCCACGGTGGCAAGGTGACCATCAACGGCAAGTGCGTAAA
CTGCTCCCATGATCAAACGACTACCACCACGCACAAGCCAACAAGTGGAA
AAGGAAGTGGAGGTAGGACGACAGCCCGGCCAAGCTCGAGATCATCTCCA
GCCCGCGGTCGCCCATCATGGGATGACGATGATGATGATGACCTGACCGG
TGACTGGGCACTGCATCAATCGGCTGGAGGAACTCAATACATTGGCAGGC
GTTCGAAGCGTCAGTCACGCGGTGGTCAGTACATCGATTTGGGCGGATCT
GGCGGAAGGGGTGGAGGCGGAGGATGGGCAGGATCTGGCATAACCACCAT
CGATTCCAGTGGCTATCCCGGCGGAACACTGGTGCGCAATAGTGATTGCG
TCGGTTGCAATATTCGCGGAGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAAGCCATCACAAACGGCATGATGAACCTGAA
TCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATG
GTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAA
ACTGGTGAAACTCACCCAGGATTGCTGAGACGAAAAACATATTCTCAATA
AACCCTTTAAGGAAATAGCAAGTTTCACGTACACCGCCACATCTGGCGAA
TATATTGTGTAGAACTGCGAATCGTCTGCTATCATTCAGAAGCGATGAAA
CGTTCAGTTTGCTCATGAAAACGGGTGTACAGGGTGAACCTA
UFO09852.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15067-RB | 505 | CG15067-RB | 19..480 | 9..470 | 2310 | 100 | Plus |
| CG15067-RA | 711 | CG15067-RA | 19..480 | 9..470 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18385055..18385459 | 470..66 | 2025 | 100 | Minus |
| 2R | 25286936 | 2R | 18385512..18385571 | 68..9 | 300 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:20:12 has no hits.
UFO09852.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:01 Download gff for
UFO09852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RB | 14..484 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:40 Download gff for
UFO09852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RA | 15..485 | 1..475 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:17 Download gff for
UFO09852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15067-RA | 15..485 | 1..475 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:17 Download gff for
UFO09852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18385514..18385575 | 1..66 | 93 | | Minus |
| 2R | 18385055..18385458 | 67..470 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:40 Download gff for
UFO09852.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14273019..14273080 | 1..66 | 93 | | Minus |
| arm_2R | 14272560..14272963 | 67..470 | 100 | <- | Minus |
