UFO09855.5prime Sequence
1104 bp (1000 high quality bases) assembled on 2011-10-17
> UFO09855.5prime
CAGTCGACATGGCTGAAAGTCAGGAATCCCCGCAGGATTCGTCGGTCTCG
TCACGCATCACGCTCTTCAACCAACAAGCTGAGCAGCATAAAAACTGGAT
GATGATAAACCCCTTTGCCCATTACAACGTCAACGAGATGCCCAAGAGGA
CCTTTCCAGAGGAGGAATACGGCAGAGCTCCGACGGGCAGTCTTTCCGAG
CAGAGATCCTTGCAGGCCAATGTACGTGCTCTGGAGGAGATTCTCCAACT
GTGCGATTTGATACAGAAATCCGGTCGTGATGATCCCATTGATGGCCGAA
AGGTACTAGCTTTCGGGCAACTATTTGAAACTTACAACAATATCTCCGAC
AAGTTGCTTGCCACTCTGTTGGGTGCCCGAAAGTATGGGTTCGTAGACTT
TAGCGGAGAAACCCTTTTTCAAGGTCGTGATGATACAGAACCCGTCCGCC
TGCTTCGCCCCTTCGAGGAGCTCCAAGCCGAAATCATTTCCAAGGTCGCC
GATCTGCGCTGCGATTTCACTGAAAAACCGGAGGAACCGACTCTGCTTCG
CGAGGATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGTATTCTCACCAATAAAAAACGCCCG
GCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTA
CTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCC
GCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGA
CATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATC
AGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGC
GAAGAGTTGTCCATATTGGCACGTTTAAATCAAAACTGTTGAAACTCACC
AGGATGCTGAAACGAAAAACATATCTCATAACCCTTAAGATAGCCAGTTC
ACGTAACACGCCACATCTGCGAATATTGGTTAGAACTGCGATTCGTCGTG
ATTC
UFO09855.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2113-RA | 926 | CG2113-RA | 79..627 | 9..557 | 2745 | 100 | Plus |
| CG2113-RB | 914 | CG2113-RB | 91..615 | 33..557 | 2625 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2995321..2995856 | 22..557 | 2680 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:20:24 has no hits.
UFO09855.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:02 Download gff for
UFO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 71..619 | 9..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:44 Download gff for
UFO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..627 | 9..557 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:20 Download gff for
UFO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2113-RA | 79..627 | 9..557 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:20 Download gff for
UFO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2995323..2995856 | 24..557 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:44 Download gff for
UFO09855.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2995323..2995856 | 24..557 | 100 | == | Plus |
