UFO09902.5prime Sequence
1048 bp (860 high quality bases) assembled on 2011-10-17
> UFO09902.5prime
CAGTCGACATGCCTCGCCTCTCGGTTTTCTGCGGATTATCGCGTAGAATC
ATCTGCTCCAGCACTGCTCACCGAAACCTTTGGCGACTGTTGTCCGACAG
TTCGGAGTCGACCATTATCCCACACGTTTCGGACAAAACGGAAAGTGTGA
AGAAATTCAAAAAGGAAACGCAGGTGGATCACACAAGTCACCTATTTGTA
TGGCCGGAGGCGAAGGACGAAAACGTTCATCATGTGAAAGAGAACAAAGA
GGATAGCAATGACGATATAACTGCATCCTGGGGCTGGAAAAATGACGAGC
TTGACGTGGAGCAATTGGCAGGACTACCAAGTCCTAATGAGGTGGAGGAT
CCATACCGGCAGCCAAACAATGAATCTCAGGATGATCAGTTGCCATTCGC
TGAAGGAGACCAATCAGGAATTCAAGAAGAATTACAATTCGCAAGAACGC
GCTCCCTGCGAGAACAGCTTGTCAAGAATCAGGCGTCCCAAGAACCTTTT
ACCAGCTTTGAGAAAACATCTCTCACATCCGTTTCGAAGGAATGTGGACT
TCATGATGCAAGAGCTTAGTCAGATTTCACTTATTTTGAATACTATGGGA
GGAGGTGAAAAAACAATGGGGATGGTTAACTCTGAACCGGATGTGGCTTC
CTTTGCACTCAACCAACCCAAAATCAGTGAAAGTTTGAATCATGAGGAGG
AATCAAATCAGTCAGTGGATAGAGCTAGTTCCCATCAATCTGAGCTAGGT
GTTGCAGATTCTATGCATTCGGAGGTAGCCAGTGCGCTCTCAGAACCATC
TGGATTGGGTGATGTAGAGAGCCTAGATCATAAGCGAGATTTCGAACCAG
TCTTTTTGATTTCGAACTACGAGGGGATATCCACCGATCAACTAAATTGG
AATCACGAGATGGAAGCACATCAGTCGTTGGAATTCCTGAATTACCGGTG
AAATAACTACATCAATCTAGTCGGGTAGTTCAGAAGTCTTCATTCCCGAT
GGAGGGACTTCCGGGAAAGAGCTAAAAAACCATCTCTCAAAATCAGAC
UFO09902.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:20:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| spaw-RB | 2691 | CG30365-RB | 1233..2263 | 7..1044 | 4580 | 97.1 | Plus |
| spaw-RA | 1552 | CG30365-RA | 94..1124 | 7..1044 | 4580 | 97.1 | Plus |
| hubl-RB | 2691 | CG30364-RB | 1233..2263 | 7..1044 | 4580 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:20:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8359957..8360924 | 980..7 | 4285 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:20:50 has no hits.
UFO09902.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:04 Download gff for
UFO09902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RA | 94..1091 | 7..1011 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:18:58 Download gff for
UFO09902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| spaw-RA | 94..1091 | 7..1011 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:31 Download gff for
UFO09902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| hubl-RB | 1233..2230 | 7..1011 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:31 Download gff for
UFO09902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8359918..8360924 | 7..1022 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:18:58 Download gff for
UFO09902.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4247423..4248429 | 7..1022 | 97 | | Minus |
