UFO09905.5prime Sequence
802 bp (796 high quality bases) assembled on 2011-10-17
> UFO09905.5prime
CAGTCGACATGGAAATGCTCGATCGGCTGTACCAAATGATGGTGAGCCAG
AGCTTTATGTCGAGAGGCACGGTGACCGCGAGCATGGCCAATTTTGCGAT
TGGAAATCTTAGAAGTTCCGATGCTGTAGAAAAGAGAGTGATCAAAATTC
TGCTGGTGATCGAGGAGAAGTATCGGAGTTACTTTGACAGCTATAGGAAG
GAGCTAGAGCTCCAGAGGATAGCGGCAGAAACACTGCACCAGCTAATCCA
GCGCTACAAGATCACCATGCAGCTGGACACCAGCTGCACATGTCCGCAGA
TCTATGATATCGAATCGGATGATGCGATCATCAACAAGTTCTACATCCAC
TATCAGGTGATAGCCAGTTCAAACAAGAATCAGTGTTGGGCCATCCAAAG
CCTGCGTCCGTATGTGCTTGTCTTTCGCCGTGAATGTGCCAAGTTGAATA
GGAGCGAGGAGAGCCCCTTCATTCTGGGCGATGCCTTCCACAAGCCCATT
CAGTTCTTTATCGACCTGGTGGAGGAGCTGTTCGCCTACTTCTACAGTGG
ACACCTTCAGCTGGATTGCGCGGCGCGTCTGTTGGATCCCTTGGATCTGT
ACCGAATGGAGTGCTACATGAAGCTATTTGGAGCCCAACGAGGACTTTGC
CGAATACTTTCTGCACAACATAAGCTTCTGCAAATGCATGCGGCCGCCAC
CGATGTGTCCGCCGTACGAACACCATCAAAAGATCAAGGATCAGTCCGAC
GCATATCTCAGTCATGCCAAAGAAGAGCGATGTGCCAAGCGGTTTGAGAG
AT
UFO09905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30391-RA | 1538 | CG30391-RA | 98..889 | 9..801 | 3850 | 99.2 | Plus |
| CG30393-RA | 1216 | CG30393-RA | 194..747 | 138..692 | 1025 | 79.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21265454..21266245 | 801..9 | 3810 | 99 | Minus |
| 2R | 25286936 | 2R | 21266833..21267386 | 692..138 | 985 | 78.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:22:00 has no hits.
UFO09905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:10 Download gff for
UFO09905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..889 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:38 Download gff for
UFO09905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..889 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:01 Download gff for
UFO09905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30391-RA | 89..889 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:01 Download gff for
UFO09905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21265452..21266254 | 1..802 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:38 Download gff for
UFO09905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17152957..17153759 | 1..802 | 98 | | Minus |
