Clone UFO09908 Report

Search the DGRC for UFO09908

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:99
Well:8
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG18313-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09908.5prime Sequence

1081 bp (936 high quality bases) assembled on 2011-10-17

> UFO09908.5prime
CAGTCGACATGGATTTCAACAAGCGACAGAACATGGAGGAGGTGGTGCGC
ATCGGAGGCAAAGGATCTATGCGCCGCAAGCATAAGAGAATCCCATCAGT
AGCTGCGGTCGATGAGAAGCGCGTGCAGGCGACATTGGCCAAGATACCGT
TAAAGAATATCAGCGGAATCCATGAGTTGACCATCGAGTTCACCGATTCC
AGTGAGGTTGTGGTAGTCATGCCCAAGGTTCAGGGCATCTCTGCCAATGG
TTTGTTAGTTGTTAATGGCGATTTCGTGCGCAAATCGTCAACAGCTGGCC
CATCGAAAATGGCCAAAGCAGCCAAGGCACCCAAGGCACCCAAGGCACCC
AAGGCACCCAAGACACCCATGGCACCCATGGCACCCATGGCACCCATGGC
ACCCATGACACCCAAGCCGGAAGCTTTTTCCGTCAAAAAGCCAGAATCAG
AGGAAACCATTAAGGTGGTGGCCAAGAAGCCCAAGAAGCTGCGCAATCGT
GTTCGTCCTCGCAACAAGAAGGTCCAAATGATGCTCTCTAAAAACAATGA
GGAAGCAGCCATGGCTGGCGGGGATTCGGAGCCGAAGCTTAGCAATGGTA
AATCAATTTTGATCTCCTCTGAAGATGGTAGCGATCCGGATAATGAGAAG
GTGCCATCGGATGAGTCTGATGTGGATCGGACCGTCGTCTGCGACAAAGA
TTCGCTGGGAAGTTTCGGCGATGATTCCGACGGCAAGGAGGACGATGACA
GTAAGGAGTCGATTTACCTATCTTTCTACTCCGATGGCTATGATTCCGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTGGGAGATCCTGAT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCGCGGCAACCGAG
CGTTCTGACAAATCCAGATGGAGTCTGAGTCATACTGGATCTATCACAGA
AGTCCAGCGAGCTCGATATCAAATTACGCCCGCCCTGCACTCCATCGCAG
TACTGTTGTATCATAAGCATTCTGCCGACAT

UFO09908.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
betaNACtes4-RA 1012 CG18313-RA 103..891 9..797 3945 100 Plus
betaNACtes3-RA 967 CG32601-RA 419..848 367..799 1735 93.5 Plus
betaNACtes6-RA 967 CG32598-RA 419..848 367..799 1690 92.8 Plus
betaNACtes3-RA 967 CG32601-RA 118..468 9..362 875 84 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14380507..14381295 9..797 3945 100 Plus
X 23542271 X 14379278..14379707 367..799 1710 93.5 Plus
X 23542271 X 14316249..14316678 799..367 1665 92.8 Minus
X 23542271 X 14171744..14172169 795..367 1555 91.4 Minus
X 23542271 X 14314760..14315019 799..540 1120 95.4 Minus
X 23542271 X 14172120..14172470 362..9 955 85.3 Minus
X 23542271 X 14316629..14316979 362..9 850 83.3 Minus
X 23542271 X 14378977..14379327 9..362 850 83.3 Plus
X 23542271 X 14315113..14315412 308..9 675 81.7 Minus
X 23542271 X 15576746..15576921 559..736 415 84.2 Plus
X 23542271 X 14315018..14315112 484..390 265 85.3 Minus
Blast to na_te.dros performed on 2014-11-27 00:22:09 has no hits.

UFO09908.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:10 Download gff for UFO09908.5prime
Subject Subject Range Query Range Percent Splice Strand
CG18313-RA 103..896 9..803 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:43 Download gff for UFO09908.5prime
Subject Subject Range Query Range Percent Splice Strand
betaNACtes4-RA 103..896 9..803 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:04 Download gff for UFO09908.5prime
Subject Subject Range Query Range Percent Splice Strand
betaNACtes4-RA 103..896 9..803 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:04 Download gff for UFO09908.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14380507..14381300 9..803 99 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:43 Download gff for UFO09908.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14274540..14275333 9..803 99 == Plus