UFO09910.5prime Sequence
1104 bp (920 high quality bases) assembled on 2011-10-17
> UFO09910.5prime
CAGTCGACATGTGCTGTGCACCGATGTGTGGGCCCTCGGTCTGCGGGCCT
TCGATGTGCAACCCGCCCGCTTGTCGTGTGCCACTGGAGCCACTGCATCC
GTCAACAGTCTACCACTGCTGTCCGTCCACGAAGTGCACGCTGTGCTGTA
ATAACGAATCAAAACACGAGTGCCACTGCACCTGCCAGCGCAACAAGCAC
ATCGTGGAGGCGTTCAGCTGCCTGTTCCGGGTTAGCAAGTTCCAGATCCT
GACCACCCTCTTTCTACTGGCCTATCATGAGAGCAGACCGCTGCCGCGCT
TTCCGCGCGATCGCAACTGGTCGGTGATGGAGAACGTGAAGGCACCGTAC
TCGGAGTTGCACGACCTGAGGATCTACGACAGCCTGTTCGATCGCTGTGG
CAACCGCATCGATCCGCTCGACCAAAAGAACACGTACAAGCTGTTGCGCC
TGATCTTTCTCGGTCCAGTGCTAGTGCCCGATCAGCAGGCACAGCTACTG
GCCATGCTGTACACGCTAAATGCCCATGCCGTCTGTCCCGTGGATCTCAA
TGGCCTGCTATCGGTACTGCAGTATGTGAAGCTGGATGAGCTGGTGTGCG
GCATCTTGGAGCAGGACGGACGAGCGAAACGTTTCCACAGCGGGCGGCAG
TGCTTGGAGCTGTGCAATCTCTACCAGAAAGTGGTCGCCACGGACAAGGA
TGCGGTTATTAAAAAGCATCGCCGTCGCAAGGAGAAGTCCAAGAGCAAGG
ATTCGGGAGGCACAGAAGAAGCCGCGTAGAACCATCACCGCGCAGATATA
CTGCACGCGTCGCGTTCCGGAGCCCGAGGATGTTAGCTCACGGATTCGAG
ACTATCACTCCCAATCGTACGCAGTACAGCCACCTCGTTGCGTCGCTCCT
CCAACAAGGAAAAAGCTGGATGCCGGTCAATCGGAGCAGCATAATAACTT
CGAAAAAGGGAATCTCGCCGGGGTTCGCGCATCCTCGCCGGGCTCACCGA
AAAAAAAAACCAGCCGAAGTTGTCCCATGGTGGATTGCAAATGCAGGCGG
CGAACCGCCTAAAGAACGAGGCAAGCCTTTCTCAGAACCATCGATTGGGC
CGCG
UFO09910.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2898-RA | 1255 | CG2898-RA | 125..1175 | 9..1069 | 4730 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10375498..10376471 | 9..988 | 4485 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:21:07 has no hits.
UFO09910.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:05 Download gff for
UFO09910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2898-RA | 122..1110 | 6..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:08 Download gff for
UFO09910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2898-RA | 122..1110 | 6..1001 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:39 Download gff for
UFO09910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2898-RA | 122..1110 | 6..1001 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:39 Download gff for
UFO09910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10375495..10376483 | 6..1001 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:08 Download gff for
UFO09910.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10269528..10270516 | 6..1001 | 98 | -> | Plus |
