UFO09916.5prime Sequence
1142 bp (1006 high quality bases) assembled on 2011-10-17
> UFO09916.5prime
CAGTCGACATGGATCACAAGTGGATAATATTTTTCTTCAGCATTGCTGCT
CTGCTCTTATGCAATTTTGTTAGAGCCGATGAAACGGAAACGGAAGTGGT
GCAGGAGAAACCAAGCTCTATTCAGCTGCTGGACGCCGGAGAAACGGCCC
AGTCTGATTCCACAGACGAGAACGTTAGGAAAGTGCGCCAGTACTTTGGA
CCACCACCGTTTGGACCACCGCCACCACCCTTCTTTGGACCACCTCCACC
ACCGTACTACGGCGGCGGCTTTGGTGGCGGATTCGGCGGTGGTTTCCAGA
GAACTCGAGTGGTCACCCGCACCCGTTACCGCGGACGCGGTGGTTACTAT
GGCGGTGGATTCTACGGCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCG
GGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACA
ACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATA
AAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTC
TGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCA
AATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAG
CATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCG
CCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTG
AAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAACTG
GTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAA
CCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCCACATCTTGC
GAATATATGTGTAGAAACTGCCGGAAATCGTCGTTGTATTCCCTCCAGAG
CGATGAAACGTTTCAGTTTGCTCATGGAAACCGGTGGTAACAAGGTGACA
CTATCCCAATATCCACAAGCCTCACCCGGTCTTCATGCATACGAATTCCG
GATGGACCATTCATCAGGCGGCAGATGTGAATAAGGCCCGAATAAACCTG
GCTATTTCTTACGGCCTTTTAAAAGGCTGATAATCCACGCTG
UFO09916.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:23:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13227-RA | 504 | CG13227-RA | 34..398 | 4..368 | 1810 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:23:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11235285..11235649 | 4..368 | 1810 | 99.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:23:11 has no hits.
UFO09916.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:16 Download gff for
UFO09916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13227-RA | 30..399 | 1..372 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:15 Download gff for
UFO09916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13227-RA | 32..401 | 1..372 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:29 Download gff for
UFO09916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13227-RA | 32..401 | 1..372 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:29 Download gff for
UFO09916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11235283..11235649 | 1..368 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:15 Download gff for
UFO09916.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7122788..7123154 | 1..368 | 99 | == | Plus |
