UFO09922.5prime Sequence
1093 bp (997 high quality bases) assembled on 2011-10-17
> UFO09922.5prime
CAGTCGACATGGTCTACTATCAATTGCGGGCCTCCAGGACGCCACTTCTC
TGCTGTTTGGGTCTTTTTGTTGTCTATCTGCTCTACCAGTCACTTGGATC
ACTCCAAGTGTTGAATAACCCACAGGGAACTATATCACAGCCAGCATCCC
GGCCCAAAAAGGTTGCTGTCGTTCACCATGGAGCCCATCCAGGAATCGAT
ACCGAAGGCAAGGAGAGCGCGGGATCGCAGCAGGAACCGAATCTGGAGGA
ACTGTTGCGGAGCAAAGAGGACGTGGACTGGGTGCGTCTGCGGGCTGACC
AGTGTGCCCCGTATCCCCGCTACGAAGACATCGAGTTTCCGAATCCCTAC
TTCCAGCTAACAAGGCATGAAAATCTATCTTACTATCTCTATGGGGCATA
CTACGACCGGAGGCCCAGGATACCGGAGATGGTGGTCCTCGGAATGGCCA
CCTACAATGGTTCCTATCCGGCCACCTATTTGCAGGTTTGGTACGATGGC
GATAACCAGCCAGAAAAGTTGCCCGTATACCAAAGCAAATTGGGCTGGTA
CAAGGAGTGGGGCCTTCCAGAGGGTGTTGTATTTCCTACGCTCCTAACGT
TTCAAATGAATCCCAAAGGGTTCCACAGCTGGTGAGTCTGGTCTTCGATC
CGTGTGCGGTGCCAACGAATGCCTTTAAGGTGGTACCACCGCCACCCGAG
GAGCCACCAAATGCACAACGTCCAAAGCGAATCGGAGTTTGTGTGAAATA
TCTCCGATTTCCCGACGTCGACATGACCGATAGATTTGTGGAATGGCTGG
AACTGATGAGGCTACTGGGTGCCACCAAAGTGACCGCCTTCGATATTGGA
CTCCTTATGCCCAACACAAGAGAACCCTTGCCCACTACACGGGAGCTGGT
GATGGATTCTTGATCTGCGGAAATTCCGTTTTCCAATGAGACCGCAGATC
ACGAGAACATTCCGTGCGATGAATATGGAGGTGCTGCTGTACATTGACTG
TTTAATACCGGATTCTGTACGAATTTCGAATTTTGGTGGCCCGTGGTGAA
TTGGAAGGAGGTAATAATGCCAATGGATGGAACCATCGCTAAC
UFO09922.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:22:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12715-RB | 2107 | CG12715-RB | 37..1102 | 9..1076 | 4945 | 98.1 | Plus |
| CG12715-RA | 1959 | CG12715-RA | 37..1102 | 9..1076 | 4945 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:22:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13053902..13054764 | 1022..162 | 3950 | 98.7 | Minus |
| X | 23542271 | X | 13055139..13055292 | 162..9 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:22:17 has no hits.
UFO09922.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:11 Download gff for
UFO09922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 1..999 | 9..1004 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:46 Download gff for
UFO09922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 28..1035 | 1..1004 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:09 Download gff for
UFO09922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12715-RA | 28..1035 | 1..1004 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:09 Download gff for
UFO09922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13053919..13054763 | 163..1004 | 98 | <- | Minus |
| X | 13055139..13055296 | 1..162 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:46 Download gff for
UFO09922.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 12947952..12948796 | 163..1004 | 98 | <- | Minus |
| arm_X | 12949172..12949329 | 1..162 | 97 | | Minus |
