Clone UFO09927 Report

Search the DGRC for UFO09927

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:99
Well:27
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG14253-RC
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09927.5prime Sequence

1047 bp (958 high quality bases) assembled on 2011-10-17

> UFO09927.5prime
CAGTCGACATGGAGCTGAAAAAAAAATACAAACAAGGAAAGCTAACCACC
AGCGATATTGCCCATATAAATCATATAGTAATATGTCTCATGGTCATGAT
AGCAGTATTCTCCATACTATGGAACATAACGCTGATCATGATATCGGGTG
ATCTGTACGAGGGAATAGTCAGTGCCAAACTTATCTTCCGGGAGCGCAGC
GTTGATAAAATGGATGAGTCCAGCAAGGAGATCCTTCATCGGGATTTCAT
CAAAGCCACCCAGTATGCCTATGGAAGGCAGTACTCCGTGCAGGATGTCA
CACCTGAATCGCTGAAGAGCGAGAGCCAAATCTTTAAGTTACCGCATATC
TACGAATCTATCGAGAATCGACCGAAATTGGAGCGTCTCATTGCTGAAAA
TAAAGTGGAGGTTATTTCTACCACGACGACTCCTCCACCGAAGATCACTT
TCAATGCTGAGGCGGATCGCCACTTTTTGAGCACAATGTCCATCGATGTT
ATGGCCACTGTCTGGGAAAGAGGACCAGGAGCTCAGTTTGTCTACGTATT
TCCCCTCATATCAGAGATCGTGGCCATTATCTGGACAGCCATGTGTTTGA
TTTACCAGACAGGCAGCAAAAAGAGCTCAGTTTTGCCGAAGCCGTGGCGC
ATTGTGGTGCCCTCCATCGTTATCTTCTCGGTGATGAGTTTGTGCAGTGT
AATCTACACAATCCTGACCAATGGCCACCTTAAGCACCTCTGTGGCCAAC
TGAGGGAGAATCTCACAGATCCCACTGCCATCACCTGCGGCGATGCCCAT
CGCCCTGTTGCGTCCCATCATTCACGACCACAACGTATCCCCATGATACT
TTATCTGGGAGCTCTTCCGCTTCAGCTACCTTGATCGGAAATGGTACTGT
GGATAGTGGCCTCTGCTGGGTCATGGGTGCTGCGTTATTGTTATTCGCCG
GTTGAACTTCCCAGCCTGGGTGAACTTTGATGAATCTTGTTTCCGAATAT
GGCGACCGAAATGGCTCTTGCCACAGGTTCCAGAATTTCCAACCCGG

UFO09927.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG14253-RF 2286 CG14253-RF 665..1623 9..983 4425 97.9 Plus
CG14253-RA 1981 CG14253-RA 360..1318 9..983 4425 97.9 Plus
CG14253-RD 2361 CG14253-RD 740..1698 9..983 4425 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:03
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 26983963..26984217 73..327 1275 100 Plus
3R 32079331 3R 26984705..26984980 629..910 1110 97.9 Plus
3R 32079331 3R 26984276..26984434 328..486 795 100 Plus
3R 32079331 3R 26984490..26984636 482..628 720 99.3 Plus
3R 32079331 3R 26981688..26981751 9..72 305 98.4 Plus
Blast to na_te.dros performed on 2014-11-27 00:24:04 has no hits.

UFO09927.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:20 Download gff for UFO09927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 716..1664 1..961 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:43 Download gff for UFO09927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 731..1679 1..961 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:49 Download gff for UFO09927.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14253-RD 731..1679 1..961 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:49 Download gff for UFO09927.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 26981679..26981751 1..72 93 -> Plus
3R 26983963..26984217 73..327 100 -> Plus
3R 26984276..26984434 328..486 100 -> Plus
3R 26984495..26984636 487..628 100 -> Plus
3R 26984705..26985024 629..961 95   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:43 Download gff for UFO09927.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22807401..22807473 1..72 93 -> Plus
arm_3R 22809685..22809939 73..327 100 -> Plus
arm_3R 22809998..22810156 328..486 100 -> Plus
arm_3R 22810217..22810358 487..628 100 -> Plus
arm_3R 22810427..22810746 629..961 95   Plus