UFO09927.5prime Sequence
1047 bp (958 high quality bases) assembled on 2011-10-17
> UFO09927.5prime
CAGTCGACATGGAGCTGAAAAAAAAATACAAACAAGGAAAGCTAACCACC
AGCGATATTGCCCATATAAATCATATAGTAATATGTCTCATGGTCATGAT
AGCAGTATTCTCCATACTATGGAACATAACGCTGATCATGATATCGGGTG
ATCTGTACGAGGGAATAGTCAGTGCCAAACTTATCTTCCGGGAGCGCAGC
GTTGATAAAATGGATGAGTCCAGCAAGGAGATCCTTCATCGGGATTTCAT
CAAAGCCACCCAGTATGCCTATGGAAGGCAGTACTCCGTGCAGGATGTCA
CACCTGAATCGCTGAAGAGCGAGAGCCAAATCTTTAAGTTACCGCATATC
TACGAATCTATCGAGAATCGACCGAAATTGGAGCGTCTCATTGCTGAAAA
TAAAGTGGAGGTTATTTCTACCACGACGACTCCTCCACCGAAGATCACTT
TCAATGCTGAGGCGGATCGCCACTTTTTGAGCACAATGTCCATCGATGTT
ATGGCCACTGTCTGGGAAAGAGGACCAGGAGCTCAGTTTGTCTACGTATT
TCCCCTCATATCAGAGATCGTGGCCATTATCTGGACAGCCATGTGTTTGA
TTTACCAGACAGGCAGCAAAAAGAGCTCAGTTTTGCCGAAGCCGTGGCGC
ATTGTGGTGCCCTCCATCGTTATCTTCTCGGTGATGAGTTTGTGCAGTGT
AATCTACACAATCCTGACCAATGGCCACCTTAAGCACCTCTGTGGCCAAC
TGAGGGAGAATCTCACAGATCCCACTGCCATCACCTGCGGCGATGCCCAT
CGCCCTGTTGCGTCCCATCATTCACGACCACAACGTATCCCCATGATACT
TTATCTGGGAGCTCTTCCGCTTCAGCTACCTTGATCGGAAATGGTACTGT
GGATAGTGGCCTCTGCTGGGTCATGGGTGCTGCGTTATTGTTATTCGCCG
GTTGAACTTCCCAGCCTGGGTGAACTTTGATGAATCTTGTTTCCGAATAT
GGCGACCGAAATGGCTCTTGCCACAGGTTCCAGAATTTCCAACCCGG
UFO09927.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14253-RF | 2286 | CG14253-RF | 665..1623 | 9..983 | 4425 | 97.9 | Plus |
CG14253-RA | 1981 | CG14253-RA | 360..1318 | 9..983 | 4425 | 97.9 | Plus |
CG14253-RD | 2361 | CG14253-RD | 740..1698 | 9..983 | 4425 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26983963..26984217 | 73..327 | 1275 | 100 | Plus |
3R | 32079331 | 3R | 26984705..26984980 | 629..910 | 1110 | 97.9 | Plus |
3R | 32079331 | 3R | 26984276..26984434 | 328..486 | 795 | 100 | Plus |
3R | 32079331 | 3R | 26984490..26984636 | 482..628 | 720 | 99.3 | Plus |
3R | 32079331 | 3R | 26981688..26981751 | 9..72 | 305 | 98.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:24:04 has no hits.
UFO09927.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:20 Download gff for
UFO09927.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14253-RD | 716..1664 | 1..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:43 Download gff for
UFO09927.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14253-RD | 731..1679 | 1..961 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:49 Download gff for
UFO09927.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14253-RD | 731..1679 | 1..961 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:49 Download gff for
UFO09927.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26981679..26981751 | 1..72 | 93 | -> | Plus |
3R | 26983963..26984217 | 73..327 | 100 | -> | Plus |
3R | 26984276..26984434 | 328..486 | 100 | -> | Plus |
3R | 26984495..26984636 | 487..628 | 100 | -> | Plus |
3R | 26984705..26985024 | 629..961 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:43 Download gff for
UFO09927.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22807401..22807473 | 1..72 | 93 | -> | Plus |
arm_3R | 22809685..22809939 | 73..327 | 100 | -> | Plus |
arm_3R | 22809998..22810156 | 328..486 | 100 | -> | Plus |
arm_3R | 22810217..22810358 | 487..628 | 100 | -> | Plus |
arm_3R | 22810427..22810746 | 629..961 | 95 | | Plus |