Clone UFO09929 Report

Search the DGRC for UFO09929

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:99
Well:29
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG9941-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09929.5prime Sequence

691 bp (682 high quality bases) assembled on 2011-10-17

> UFO09929.5prime
CAGTCGACATGGGCAACTTTGGGAGCAGACAGAACGCGGCGGTGGAGGAG
GCCGATCCGAGCACGAACAATGCCTACAAGTATCCACCGAGAATGGGTAA
CTTCTTTGGCACCCACTTCATCATGGGCGGCGAGCGCTTCGACACGCCCC
AACCGGAATCGTACTTGTTTGGCGAGAATGCGGATCTCAATTTCCTGGGC
AATCGACCCACAGCCTTTCCGTATCCCCCGCCGCAGGCCAATGAACCGAC
GAAGACCCTGAAGAGTCTGGTCAACATTCGCAAGGAGTCGGTGCGTTTCG
TCAAGACGATGAACGACAAGAAGCTGGGCGGTGTACTCGAGAAGCCCAAG
ATGAAGGAGATTGATCGGGACTTGGATCTGGACAAGGAGAAGTCCAACGT
GACCATCGAGGATGTGGATGGAAATGTGCTCTGCTCGATGGGTTTGGGTG
GCGGTGATGCCGATATGACGCCCCCACCGCCGCCCTGCTCTTACAACATC
GAGTTTACCTTTGACTCGGACGCCAAGTGCGCCATTACCATTTACTATTT
CTGCTCGGAGGATGTCAGTCCCAGCGGCGTGACACTGGTGCCCGCGCGAG
GGTCTCACCTCGGAGACGTACCACTACGAGAAGGGCATCAATCAGTGCTT
TCTCGCATCCGAGCCTTGTCTTAATCCGCAACAGATGCCCG

UFO09929.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG9941-RA 3113 CG9941-RA 302..983 9..691 3285 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:24:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 13720995..13721676 691..9 3210 99 Minus
Blast to na_te.dros performed on 2014-11-27 00:24:22 has no hits.

UFO09929.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:21 Download gff for UFO09929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 343..1031 1..691 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:20:53 Download gff for UFO09929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 295..983 1..691 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:05:55 Download gff for UFO09929.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9941-RA 295..983 1..691 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:05:55 Download gff for UFO09929.5prime
Subject Subject Range Query Range Percent Splice Strand
X 13720995..13721681 1..691 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:20:53 Download gff for UFO09929.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 13615028..13615714 1..691 98   Minus