UFO09947.5prime Sequence
1083 bp (975 high quality bases) assembled on 2011-10-17
> UFO09947.5prime
CAGTCGACATGGTTTACATATGCACTCTTGTGGTGTTGATCTTTCCCGTC
TTGTTGTTGGGTGCACCATGGGAAGGGTCGCATCCTAAGTCTCAGGTGGA
ATACATCAGCAACGACAAGAGAGTTGATTCTGGCTTCGCCAACCCCAATA
TCGTGCCCATCACCCAGCCGTCGGTCGTAACGCAAACAGCTCCTCCTCCG
CCGCCAAATTCCAAAAACTTTGCATATAGTCCGATGACGCAGAGCTGGAC
CCTCATTGCGCCAGGCGATCCGCTGCCCAATAATGACACCCTCGTCTGGA
ACCAGAGCAATGACAAATGGCTCACTCGCGCAAGCTTTCTAGACCATTCG
TTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAA
TCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGAT
TCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCC
AGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGA
GCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGT
AATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATG
AACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATT
TGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTT
AAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACAT
ATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACG
CCACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCGTGTATTC
ACTCCAGAGCGATGAAAACGTTCAGTTTGCTCATGAAAACGTGTAACAGT
GAAACTATACCCCTTATCCCCCGCTCCACCGCCTTTCATTTGCCAAGAAA
TCCGATGAACATCATCAGCGGCAAGAATGTGAATAAAGCCCGATAACTTG
TGCTTATTTTCTTACGTTCTTTAAAACGCGTAA
UFO09947.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:25:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13877-RC | 416 | CG13877-RC | 20..340 | 9..329 | 1605 | 100 | Plus |
| CG13877-RB | 507 | CG13877-RB | 113..436 | 9..329 | 1565 | 99.1 | Plus |
| pyx-RB | 2502 | CG17142-RB | 1947..2251 | 329..25 | 1525 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:25:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 218283..218587 | 25..329 | 1525 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:25:11 has no hits.
UFO09947.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:25 Download gff for
UFO09947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RC | 109..439 | 2..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:21:18 Download gff for
UFO09947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RC | 15..345 | 2..335 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:16 Download gff for
UFO09947.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13877-RC | 15..345 | 2..335 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-27 01:06:16 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 16:21:18 has no hits.
