UFO09957.5prime Sequence
1093 bp (1002 high quality bases) assembled on 2011-10-17
> UFO09957.5prime
CAGTCGACATGTCTTCTTCGATTGCAGTGGTGCTGGTGGTGGTGCTGATT
GGGATTTCTGAGTCCATTAAGACTGATTCTCTGATGATGACCTCTTCTTT
AACTCCAGAGATTTCGAAGTCTGATAAATTAAAACTAATCGTGTCGCAAA
ATGCGGAAAGTTCAAAGGATACAGATGCCATCGAAACTGACATCTCAAAC
GAACATGATCCACGTGATGCCTTAAAGGATTCTAGTTCGCCGGATGCGGA
TGTTTTAAGGAATAAGACAACTGAAGGCTTAATTTCTTTGAATAATAAAG
CCGAGAACACAATGACAGGATTGGATGATTCTGAAAGTCTTAAGTTGGCA
CGGCCAGCGAGTTCATATCAGGAAGCGCTGCTCAATCGCCTACAGGATCA
GTTGAATCAGTTCGTTGTTGGCTTGCCCCTGGACTTGGGCTTCTCCACCT
TGAACTATATATGCAGCACCATTGTGGACCTCGGAGTGGTGAGGTCCAAG
CTAATACCGGATATGTCGCGTATGAGTTTTCTGCTTCGATCGAGTGATGA
TTGTCAGAATACCAGTATTCCACTGACGCAGGCGGAGCAGTTATGGAACA
CTACCGGATTTTATCAGGATCGACCCACTGTCTTGTTCATCACCGGCTGG
ACAACGAGCATTAACAATTCCAATAGTGGTCCCGTGGCAAAAGCTTATCT
TTGTCGCAATGATACCAATGTTTTGATTCTAGATGCTGCGAACTTCATAG
ACACCCTGTATACATGGTCTGCCCTGAACACAGAGGTTATTGGAGATTAT
CTGGCCAAGGCGCTCCTCCGGCTGAATACGAGCTATGTGACCAAACAGTT
CCATTTGGTGGGTCACAGCTTGAGCGCCCAAATAGCCGGTTCAGCGGGCA
GAAACTATCGACGATTGTCTGGGGACAATCCTGAAGAGAATCACCGGATT
GATCCGGCTACCCATGTTTTTACGATGCCATGAGCTGGAGGTTCTGCGGA
GTGGCGATGCCGATTGTAAACATAATCCCACCATCCCGCATGGTGACCAT
CGAGCGGTGGCGATGCTTGACCTTTTGTGACCAGACGATTCCC
UFO09957.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18258-RA | 1497 | CG18258-RA | 21..1060 | 8..1038 | 4900 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17212327..17213044 | 8..725 | 3590 | 100 | Plus |
| X | 23542271 | X | 17213214..17213509 | 721..1011 | 1175 | 96.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:28:12 has no hits.
UFO09957.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:38 Download gff for
UFO09957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 1..1033 | 9..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:53 Download gff for
UFO09957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 21..1054 | 8..1033 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:32 Download gff for
UFO09957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18258-RA | 21..1054 | 8..1033 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:32 Download gff for
UFO09957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17212327..17213044 | 8..725 | 100 | -> | Plus |
| X | 17213219..17213534 | 726..1033 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:53 Download gff for
UFO09957.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17106360..17107077 | 8..725 | 100 | -> | Plus |
| arm_X | 17107252..17107567 | 726..1033 | 95 | | Plus |
