UFO09958.5prime Sequence
1098 bp (984 high quality bases) assembled on 2011-10-17
> UFO09958.5prime
CAGTCGACATGGAAGGAGGCACTTTCAATCTGATGAAAACAGAATCCATT
CCCAGCTGCCTGCTTCAGCCCATCCGGGCGGTCCCCAAGTGCGTCAACTC
AAAGGAGATCCTAAGCAGTTTGGCGCGGAATCCGCGAAAGAGCCGCCTAT
ATCCTCCCCATGGCGGTCACATGCGGTCCGTTGTGGGAACCTTCTACAAG
ATCACGGACCAAATCGGTGAAATTGCGATAGGCACCAAGTTAACCGGCAC
CGTGCTGCTCGAGAGCCTGCCGGTCTTCTACGTGACCATCAATGGACCGG
GCTCCAAGCTTTTGAAATGTCTAGCCATGGGGCAGGTGCAACTGCAGGAA
CTGGAGCAGCTGCCCGACTATGGCGAAATCTTTGCATTCTACGACAAGGC
CGAGAATCGCATCTCTCGCATCGCCATTAATGCCCCCGTTCACCCCATGG
GCTACTGTGCCTATATGATCGACGCTGCCAAATATACCAACATGTCCGGC
ATGGAGCGCATCTTCGCGCTGCCGGATGATCTCAAGAAGCTGCCGGCGCT
AACGATCAAATGCCGCCTGGTCAATGTGGCCCAGATGCATATATTTATTA
CCCAAAATGTTAGACTGCGCGTCCTCGGCAGTAATGGCCTTGAACTGTTG
GTGGCCCTGATCAGGAATAGGACCAACATTCGGAAGATTCCATCCGCACA
ACTACCACCAATTTCGGGCGATGAGTACGGAAATATGGATGCAAACGATC
GGGAAGTGGCCAAATCTTTTGCACGATATAGACCCAAGCGTCGCGAACGT
GGTAGCATTGTACGCGTCCATGTCACCAGGATCGTTAGCCATGCCGAATT
CTACGCCCGATTCGCTGATGGACCAACAGTGCCCACGTGGAGCAAGAGTG
TTATGAAAAGGGGCACAAGTGATTTTCGCGTCTGGGACATCGTTCTGGCC
CATATCAGGGGCGATATCATCGCGCAAAATCGTGACTATTCGCTGCGTTA
CCGTGTCTACTTCTGACTTCGCATCCACCGATAAACAGCCAGAAAATCTA
ACATTTTGCCTATGGACCTGGAAAAGCCAAGCAACCTGCCTGAATTGA
UFO09958.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15042-RA | 1405 | CG15042-RA | 13..1097 | 9..1083 | 4965 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 18527283..18528254 | 979..9 | 4780 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:26:43 has no hits.
UFO09958.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:31 Download gff for
UFO09958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 13..1097 | 9..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:22:02 Download gff for
UFO09958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 13..1097 | 9..1083 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:06:50 Download gff for
UFO09958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15042-RA | 13..1097 | 9..1083 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:06:50 Download gff for
UFO09958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 18527170..18528254 | 9..1083 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:22:02 Download gff for
UFO09958.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 18421203..18422287 | 9..1083 | 98 | | Minus |
