UFO09966.5prime Sequence
1103 bp (999 high quality bases) assembled on 2011-10-17
> UFO09966.5prime
CAGTCGACATGGATTCGGCACTATTAAAATCACCAAGCGACTCCACACCG
TCAGCTGGACTTTTTGGAAAATTCGATGGCTTCACTCTGCGACCGCTGAA
CGATGCATCTTCACCAGCGAGCAACTACAACGGACCAAATGTGGCCTTTG
TGCAACCCACTGTGCAGCAGGATGGACCGCAGCGAATGGCCCCACCACCC
CCAGTAGTAAAACCAGGAACGGCTCCCATTCATCCCCCATCCCCGAAACC
AGAAGCTACTTGGGTGAGGCCAGCGCCCGCTTTGCCACCACCCAATCCTG
GCTCAACGGCACGTCCCATTATCTCACCACCCAAACTGGATTCTAGTACA
TTAACTATGGTACCACTCAAGGACAGCACAGAGGATCTCTCGCCCAGTCG
ATCTGCTCCTCCAGTTCCTCTACACGCTGATCCCAAGCTAAATGTTAAAC
GAGATGGTACCATTCGTCGATTTGCTTCGTTTCTGAAAAAGGAAGAGAAA
CCGCCACTAAAAGAGAAGACCTACATCGATCGGGAGCGGCTGCGAACTCT
GGAAATTTCTGCCCCTATGCCTGTGCCCGCTGCTCCCCAAGCTGAATCAT
CCAATTCCGATTCGGAGACCACTCCACGCGAAGAGGAAACCCAGAATCTG
GTAAAACGCGCACAATCCATGCGTTCGCCCACCAAAAAGGCTCCACTCCA
GAGTTTTGGATCCATGCGTTCTCCACCGGGACTGCCACGGCCGAAGAGTG
GTCAGGTGAATAGCAATGGCGCCTCGAGACCAAAGTCGCCACCTCCAAGG
CCACCGCCAGTGGTGGTCAAGAAAACAAACTCCATCAGTTCATCGGGCTA
TCAGCGGCCGGTTTCACTGCCCAGAGATCTGTGGAGAATACCTATGACGA
TTGCGAATTTGTGAGAATGAAGTGCGAGCCTCGAACGACGACTTTACTCC
GTAATTGATGAAGATTCCGCCAGCGCACAGACCTTCAAGCGGAGCGATTT
GTGTCAAACAGGCGAGTAATGCAGCGATATGGGTTTGCTAATGAAATAGT
GAATGACCTAAAAAAAGATCAACGGGAATCCAATATACTCAAGAAAGTCG
TGT
UFO09966.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:29:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Meltrin-RC | 5841 | CG7649-RC | 3205..4299 | 9..1097 | 5085 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:29:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14666449..14667543 | 1097..9 | 4835 | 98.2 | Minus |
Blast to na_te.dros performed 2014-11-27 00:29:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS3 | 1790 | BS3 BS3 1790bp | 1529..1570 | 660..702 | 122 | 79.1 | Plus |
UFO09966.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:43 Download gff for
UFO09966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Neu3-RC | 3240..4342 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:35 Download gff for
UFO09966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Meltrin-RC | 3240..4342 | 1..1097 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:02 Download gff for
UFO09966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Meltrin-RC | 3197..4299 | 1..1097 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:02 Download gff for
UFO09966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14666449..14667548 | 1..1097 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:35 Download gff for
UFO09966.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10492171..10493270 | 1..1097 | 97 | | Minus |
