UFO09972.5prime Sequence
1112 bp (977 high quality bases) assembled on 2011-10-17
> UFO09972.5prime
CAGTCGACATGTCAAATCAAGCGCATATCGACTACGACAAACAATTCCAG
GATGACCTGGCCAAGGCGACCGCCCTGAGTCTAGAGCAGCATGCCCTCGA
TGACTACAGGCGAAACAAGAAGTACGGCTCCGGGTATCAGCAAAGCTCCA
CCGTTGCTGGCCGAGATTACCAGGCGGCGCAACGTAGTCAGAGCCTACAT
CAACCACGACGGCACTCGGAGGTGCATCAGGTGGCCATCAGTCCGGAGAA
TGCGGAACGATCGCGCACACCGCCGGCCCAGGGAACGGATAACGATCTGA
TCTGCTTCGCAAGTCCCACCAGCAAGCAGCCAGAGAGTAGCAGTCCCTTT
GGCAAACTTATAGAGGATCTGCAGCGGATGCAGCCGACCAATCCGCAGTC
GGCCCTGGTGCCAATGGGTCCAGTTGCGTCGGCTTCGATTCCTCCTCAAT
ACGGCTTTCCACCTCATCAGCAACGTCCAACGGCTGCTCAGCCCACACCG
TACGGCATGGTTGCAGGTGGAGTTGTTGGTGGACCGGCTTACGGTGACCT
GCAGTTGGTGCCTTACCAACCAGCTGCTCAGCAACAGAGGCCACTAAACA
GCGAGGAGCTGCAGCGGCTGTACAGCATGCCCGCTCAAATGGCCGTGGTT
CCAGTGCCGCAGCCAAACGCCTATATGTACTATCCCGGAGCTGTGGTTAC
TCCATACACGGCTCCCATTGTTCCCGGATCGGCTGCTTTTATGCCGCCGC
AGTATCCCGCACAGGGATATGGCTTTGGAGGTGCTTACACGCACATGGAT
TTGCGTCGACCCCAATCGCAACCAGCTCCCCAACAAACAGCACCGACAAC
AGTCATCATCACAGCCAACCGTCCAACCATTCCACTTCCTCCCCGCAGAG
GCCAATGGAGTAGCCTTCCCAGCGGCGTCGCCAGTGCCCTCGACTGTCGG
GGTTAGCTCCTAGTAGCCACCACTGGAAACTATGGTCATTCCTCGGTCCC
ACGCAAGGGCCACCGATTTGATCGACCTCACCACGAGACTTACCTCCCGG
TGGAGTGGCTGGAGGCATTCGAATCCCCTGCCTACGCACATATCTGGTTT
CGAAAAGGCAAG
UFO09972.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pi3K68D-RE | 2181 | CG11621-RE | 507..1578 | 9..1081 | 4980 | 98.3 | Plus |
| Pi3K68D-RD | 6862 | CG11621-RD | 158..1229 | 9..1081 | 4980 | 98.3 | Plus |
| Pi3K68D-RB | 1880 | CG11621-RB | 206..1277 | 9..1081 | 4980 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:28:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11787192..11788212 | 1030..9 | 4730 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:28:28 has no hits.
UFO09972.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:39 Download gff for
UFO09972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RB | 201..1281 | 9..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:23:04 Download gff for
UFO09972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RB | 206..1286 | 9..1090 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:40 Download gff for
UFO09972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pi3K68D-RB | 206..1286 | 9..1090 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:40 Download gff for
UFO09972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11787179..11788212 | 9..1043 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:23:04 Download gff for
UFO09972.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11780279..11781312 | 9..1043 | 98 | | Minus |
