UFO09978.5prime Sequence
1057 bp (954 high quality bases) assembled on 2011-10-17
> UFO09978.5prime
CAGTCGACATGTCTACCTTTCGGTGTATTTACTTTCTATTTTCACTATTG
ATCTGGAGTGCTCAATCGGATAAATCTCTATCGAAACAGTCCGGAAATGT
AACCACAATTACAAATTTGAGTGTGAAGGCAAGATCCGCAGATCAGTGCA
CTCCTGGCACGATACTTAAGCTGAGAGTGGACAATTTCTTCGAAACCACC
GAAGATGGGACGTTCTTCGTAAAGTTCTATGAGCCGAATTGCATGGGCTG
CCACGATTTCGAAACTACCTGGACTGACATGGCCAAATCGTTCAAGTCGA
AGGAAAACATTTGTTTTGCTGAGCTCAATTGCAAGTTCGCAAAAACCATA
TGCAACGACTATGAGCTTCGGTATGAACCAAACCTCATATGGCTGGAAAA
TGGGGAGGAAGTTCAGCAGTACGACGGGGACTTGACTTCCCCTGGCATTA
AAATATTCGTTTGGGAAATGATTAGGCGGAATGAAACCAACAAATCCGCC
GCCAAAAGGCCATATTTTCACACCAAGCCAATTATCCTCTTTGGATGGTT
CCTCTATGCTGGGGATGTGATTTCGTATTTTGCAGCAAGCTTTCTAGACC
ATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAAT
CATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCT
TGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACA
AATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCA
AGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACT
GTTGTAATTCATTAAGCATTCTGCCGACATGAAGCCATCACAAACGCATG
ATGAACCTGAATCGCAGCGCATCAGCACTGTCGCTTGCGTATATATTTGG
CCATGTGAACGGGGCGAGAGTTGTCATATGCCACGGTTTATTCAACTGGT
GAACTCCCCAGAATGGCTGAACGAAAAACTATTTTCTCATAATCTTAAGA
ATAGGCC
UFO09978.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18132-RA | 684 | CG18132-RA | 41..616 | 9..584 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1516863..1517438 | 584..9 | 2880 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:30:01 has no hits.
UFO09978.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:47 Download gff for
UFO09978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18132-RA | 41..619 | 9..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:01 Download gff for
UFO09978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18132-RA | 41..619 | 9..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:22 Download gff for
UFO09978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18132-RA | 41..619 | 9..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:22 Download gff for
UFO09978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1516859..1517438 | 9..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:01 Download gff for
UFO09978.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1516859..1517438 | 9..588 | 99 | | Minus |
