UFO09983.5prime Sequence
1076 bp (976 high quality bases) assembled on 2011-10-17
> UFO09983.5prime
CAGTCGACATGTCGTTGCGCAGCAACAAGTTGCACAGCCAACAGTCGACG
GCCAGCAGCAACAGCAACGGCAGCAACAGTAGCGGCAACAGCGGCAGCAA
CAGCAACGTGCAGCAGCAACATCCACCGATGGCGTACCAGCAGCAGCAGC
AACAACTGCTGCAACAGCTGCAGCAGCAGCAGAAGTTCCAGGCGCAGCAG
CGGGGCAACACCAGTCGCAATAATCTGGCCACATTGGTGGCGGCCATCAA
TGGACACGACGGCGGTCAGAACTCACCCGGCAACAGTGGCTATCAATTGT
CACCCGCTGCGGCCTCCAGGGTGGCCCATGCTCCGCCCCACTCGCCGCTG
GGTCCACCCTCATACTCAGCGGCCACCGCTCAGTCCGCCTTCAGCTACTA
CGGACAACATCAGCAGCATCAGATGCAACTGAATCACAATTACCAGCAAC
AGCAGCAGCAACAGTTTCAGTTGCAGCAGCAACAGCAGCAGCTGCAGCTA
CCACCGCCCGATCTCACCGATGGCATCGATCATCCCTCCGCCCAGGCTGC
CACGCCGCCGGACTCGCCAAACGCCCAGTCCACTGGCCCATCGGATCTGG
AGCAGCAGCTCTGTGTGGTCGCCAAGATGCAGAAGTCGGTGACCATAACA
GTCACGCCGCAGCGCAGCAACTCCATGGACTTCCTCAACTTCGAGGAGAA
GCGTCAGCTCATCGCCTCGTCGTTATCCTTATCGGATATCCTGCACAGCA
GCAACGCGCAGCAGCAGCAGCAGCAGCGGCCAAGGATGGACTGGCCCATT
AACGGGGGGCAGTGCGCTAAGAAACAGAATGGAGCTGCCATACGCACAAA
TAGCCTGGTTCGGGCACTAGACGCCACCTTTGGAAAGGAAGAGCAAACTC
AGTGCCCTGGCAGATTCTTTAAGCCCTGAAATGGCGACGAAAAAGAAGAG
CGAGAAGTTCGAGCGCCTCCAAATCCCTGGAGCGTAGATTTCTGTGCGTG
CATCGTGATGAGCTAGTGCAAAGGATTCTATGCTGAAAGTCCCTGGGTCA
ATATTTCCAAACCAGGCTAGATCGTA
UFO09983.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32264-RE | 3764 | CG32264-RE | 592..1666 | 8..1067 | 4880 | 98 | Plus |
CG32264-RD | 3788 | CG32264-RD | 586..1660 | 8..1067 | 4880 | 98 | Plus |
CG32264-RM | 3767 | CG32264-RM | 1403..1669 | 816..1067 | 885 | 92.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3780418..3781231 | 821..8 | 3960 | 99.6 | Minus |
3L | 28110227 | 3L | 3769255..3769407 | 963..816 | 515 | 96.7 | Minus |
Blast to na_te.dros performed 2014-11-27 00:21:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2435..2539 | 391..496 | 212 | 67.9 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2499 | 367..534 | 183 | 61.2 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6854..6944 | 392..486 | 150 | 65.3 | Plus |
UFO09983.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:09 Download gff for
UFO09983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32264-RE | 585..1635 | 1..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:33 Download gff for
UFO09983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32264-RD | 579..1629 | 1..1036 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:58 Download gff for
UFO09983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32264-RD | 579..1629 | 1..1036 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:58 Download gff for
UFO09983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3769242..3769406 | 817..974 | 95 | <- | Minus |
3L | 3780423..3781235 | 1..816 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:33 Download gff for
UFO09983.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3769242..3769406 | 817..974 | 95 | <- | Minus |
arm_3L | 3780423..3781235 | 1..816 | 99 | | Minus |