Clone UFO09983 Report

Search the DGRC for UFO09983

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:99
Well:83
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32264-RE
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09983.5prime Sequence

1076 bp (976 high quality bases) assembled on 2011-10-17

> UFO09983.5prime
CAGTCGACATGTCGTTGCGCAGCAACAAGTTGCACAGCCAACAGTCGACG
GCCAGCAGCAACAGCAACGGCAGCAACAGTAGCGGCAACAGCGGCAGCAA
CAGCAACGTGCAGCAGCAACATCCACCGATGGCGTACCAGCAGCAGCAGC
AACAACTGCTGCAACAGCTGCAGCAGCAGCAGAAGTTCCAGGCGCAGCAG
CGGGGCAACACCAGTCGCAATAATCTGGCCACATTGGTGGCGGCCATCAA
TGGACACGACGGCGGTCAGAACTCACCCGGCAACAGTGGCTATCAATTGT
CACCCGCTGCGGCCTCCAGGGTGGCCCATGCTCCGCCCCACTCGCCGCTG
GGTCCACCCTCATACTCAGCGGCCACCGCTCAGTCCGCCTTCAGCTACTA
CGGACAACATCAGCAGCATCAGATGCAACTGAATCACAATTACCAGCAAC
AGCAGCAGCAACAGTTTCAGTTGCAGCAGCAACAGCAGCAGCTGCAGCTA
CCACCGCCCGATCTCACCGATGGCATCGATCATCCCTCCGCCCAGGCTGC
CACGCCGCCGGACTCGCCAAACGCCCAGTCCACTGGCCCATCGGATCTGG
AGCAGCAGCTCTGTGTGGTCGCCAAGATGCAGAAGTCGGTGACCATAACA
GTCACGCCGCAGCGCAGCAACTCCATGGACTTCCTCAACTTCGAGGAGAA
GCGTCAGCTCATCGCCTCGTCGTTATCCTTATCGGATATCCTGCACAGCA
GCAACGCGCAGCAGCAGCAGCAGCAGCGGCCAAGGATGGACTGGCCCATT
AACGGGGGGCAGTGCGCTAAGAAACAGAATGGAGCTGCCATACGCACAAA
TAGCCTGGTTCGGGCACTAGACGCCACCTTTGGAAAGGAAGAGCAAACTC
AGTGCCCTGGCAGATTCTTTAAGCCCTGAAATGGCGACGAAAAAGAAGAG
CGAGAAGTTCGAGCGCCTCCAAATCCCTGGAGCGTAGATTTCTGTGCGTG
CATCGTGATGAGCTAGTGCAAAGGATTCTATGCTGAAAGTCCCTGGGTCA
ATATTTCCAAACCAGGCTAGATCGTA

UFO09983.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:21:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG32264-RE 3764 CG32264-RE 592..1666 8..1067 4880 98 Plus
CG32264-RD 3788 CG32264-RD 586..1660 8..1067 4880 98 Plus
CG32264-RM 3767 CG32264-RM 1403..1669 816..1067 885 92.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:21:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3780418..3781231 821..8 3960 99.6 Minus
3L 28110227 3L 3769255..3769407 963..816 515 96.7 Minus
Blast to na_te.dros performed 2014-11-27 00:21:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2435..2539 391..496 212 67.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2499 367..534 183 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6854..6944 392..486 150 65.3 Plus

UFO09983.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:09 Download gff for UFO09983.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RE 585..1635 1..1036 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:19:33 Download gff for UFO09983.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RD 579..1629 1..1036 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:04:58 Download gff for UFO09983.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32264-RD 579..1629 1..1036 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:04:58 Download gff for UFO09983.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 3769242..3769406 817..974 95 <- Minus
3L 3780423..3781235 1..816 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:19:33 Download gff for UFO09983.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3769242..3769406 817..974 95 <- Minus
arm_3L 3780423..3781235 1..816 99   Minus