UFO09986.5prime Sequence
1115 bp (985 high quality bases) assembled on 2011-10-17
> UFO09986.5prime
CAGTCGACATGAAGTCTGTCATTCTATATCCATATGGACCGCTAACCGGC
GGCACACGTTGCTGTCGCATGTTGCATGCCAAAAATTTGGCCATAACAAG
TGCAATTTACACAATTAATATATCACTCCTAATCGTACTGATATACTCGT
GGCGCATAAATGTCAATATGCATAAGTCGGCCGATCTGCAGGATGTCTAC
TACGGTGTGCAAATAGCATATTTTGCCATAATCGGCACACAAATGTCCAT
GATACTGCTGAGCATTGTGTTAATATTTGGAATATGTCGGGAGAACCCAG
GACTAATTGTACCCTGGATAATTGGCTATATAACATTTATGGCCCTGGAA
GCTGTCGCCATGGTCTACTCCAATGTCCTGCGCGACCATGTAAATAAGCA
ATTCGACGCAATGTGCAAGGCCGAGGTGGCATTCTTTATTGCTCGTGCAC
TGATAAATGTGCTGGCCATGTGGGGAGTGCTCCGTTTCTACAACTTGGTT
CGTTCTGGAATCACATGGCGCGGACCAGAGGCCAAGACAGCCATCTTTGC
GCCGATGTACAAGAGTGTTACTACGAATAAGCCGCACACATACACCTACA
GCAAGCGGTCAAGGCGCCGCCATAGCATCGATTCGACTTCCGGCGGATGC
TGCGCCATCTTCGACTTTGACTTCGAGTACGACGATGATAACGACGACGA
CGACGATGAGGCTGCCTATGGCGATGGTCTGGATACGGAGGACGAAGTGG
GCTACGACTACGATGATTACTACGATTACTACGACGACGACGAGCTGGCG
GAGCAGCAGCACTTGGGGCTGCAACAGGACGATGGTGACTGTAGCATGTT
GGGCGCTGGCAGGCAACCAGATCGCGCTCAAGCCAAGATCCGCTGTGGTC
AAAGTCAAGGGTCAGCGGAGCGGAAGTCGCCGCAACATACAACATCCGCA
GCGTGCTGATCAACAGCGGCACAACAGTACAAATTCGCGCGCCCCAACGC
AGCTGGAGTCATCACGAGTCGAAGAGCGCGGGGAGCGCCAGCGATGAAAA
ATGATTCCTTTGTTGCCCTAATGAACGCAGTTCGTGCTGCCTCAAGTGCA
GCCTTTCTAGAACAT
UFO09986.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32204-RB | 2989 | CG32204-RB | 494..1583 | 9..1085 | 4915 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18923863..18924394 | 1047..529 | 2060 | 96.4 | Minus |
3L | 28110227 | 3L | 18928150..18928258 | 398..290 | 545 | 100 | Minus |
3L | 28110227 | 3L | 18932758..18932865 | 116..9 | 540 | 100 | Minus |
3L | 28110227 | 3L | 18930589..18930678 | 206..117 | 450 | 100 | Minus |
3L | 28110227 | 3L | 18930064..18930151 | 291..204 | 440 | 100 | Minus |
3L | 28110227 | 3L | 18924703..18924775 | 531..459 | 365 | 100 | Minus |
3L | 28110227 | 3L | 18926178..18926241 | 460..397 | 320 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 00:30:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 5326..5410 | 183..97 | 123 | 63.2 | Minus |
UFO09986.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:51 Download gff for
UFO09986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32204-RB | 492..1557 | 9..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:29 Download gff for
UFO09986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32204-RB | 494..1559 | 9..1061 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:45 Download gff for
UFO09986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32204-RB | 494..1559 | 9..1061 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:45 Download gff for
UFO09986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18930591..18930678 | 117..204 | 100 | <- | Minus |
3L | 18932758..18932865 | 9..116 | 100 | | Minus |
3L | 18923863..18924392 | 531..1047 | 96 | <- | Minus |
3L | 18924704..18924775 | 459..530 | 100 | <- | Minus |
3L | 18926180..18926239 | 399..458 | 100 | <- | Minus |
3L | 18928150..18928257 | 291..398 | 100 | <- | Minus |
3L | 18930065..18930150 | 205..290 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:29 Download gff for
UFO09986.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18923165..18923250 | 205..290 | 100 | <- | Minus |
arm_3L | 18923691..18923778 | 117..204 | 100 | <- | Minus |
arm_3L | 18925858..18925965 | 9..116 | 100 | | Minus |
arm_3L | 18917804..18917875 | 459..530 | 100 | <- | Minus |
arm_3L | 18919280..18919339 | 399..458 | 100 | <- | Minus |
arm_3L | 18921250..18921357 | 291..398 | 100 | <- | Minus |
arm_3L | 18916963..18917492 | 531..1047 | 96 | <- | Minus |