Clone UFO09986 Report

Search the DGRC for UFO09986

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:99
Well:86
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG32204-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO09986.5prime Sequence

1115 bp (985 high quality bases) assembled on 2011-10-17

> UFO09986.5prime
CAGTCGACATGAAGTCTGTCATTCTATATCCATATGGACCGCTAACCGGC
GGCACACGTTGCTGTCGCATGTTGCATGCCAAAAATTTGGCCATAACAAG
TGCAATTTACACAATTAATATATCACTCCTAATCGTACTGATATACTCGT
GGCGCATAAATGTCAATATGCATAAGTCGGCCGATCTGCAGGATGTCTAC
TACGGTGTGCAAATAGCATATTTTGCCATAATCGGCACACAAATGTCCAT
GATACTGCTGAGCATTGTGTTAATATTTGGAATATGTCGGGAGAACCCAG
GACTAATTGTACCCTGGATAATTGGCTATATAACATTTATGGCCCTGGAA
GCTGTCGCCATGGTCTACTCCAATGTCCTGCGCGACCATGTAAATAAGCA
ATTCGACGCAATGTGCAAGGCCGAGGTGGCATTCTTTATTGCTCGTGCAC
TGATAAATGTGCTGGCCATGTGGGGAGTGCTCCGTTTCTACAACTTGGTT
CGTTCTGGAATCACATGGCGCGGACCAGAGGCCAAGACAGCCATCTTTGC
GCCGATGTACAAGAGTGTTACTACGAATAAGCCGCACACATACACCTACA
GCAAGCGGTCAAGGCGCCGCCATAGCATCGATTCGACTTCCGGCGGATGC
TGCGCCATCTTCGACTTTGACTTCGAGTACGACGATGATAACGACGACGA
CGACGATGAGGCTGCCTATGGCGATGGTCTGGATACGGAGGACGAAGTGG
GCTACGACTACGATGATTACTACGATTACTACGACGACGACGAGCTGGCG
GAGCAGCAGCACTTGGGGCTGCAACAGGACGATGGTGACTGTAGCATGTT
GGGCGCTGGCAGGCAACCAGATCGCGCTCAAGCCAAGATCCGCTGTGGTC
AAAGTCAAGGGTCAGCGGAGCGGAAGTCGCCGCAACATACAACATCCGCA
GCGTGCTGATCAACAGCGGCACAACAGTACAAATTCGCGCGCCCCAACGC
AGCTGGAGTCATCACGAGTCGAAGAGCGCGGGGAGCGCCAGCGATGAAAA
ATGATTCCTTTGTTGCCCTAATGAACGCAGTTCGTGCTGCCTCAAGTGCA
GCCTTTCTAGAACAT

UFO09986.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:30:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG32204-RB 2989 CG32204-RB 494..1583 9..1085 4915 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:30:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18923863..18924394 1047..529 2060 96.4 Minus
3L 28110227 3L 18928150..18928258 398..290 545 100 Minus
3L 28110227 3L 18932758..18932865 116..9 540 100 Minus
3L 28110227 3L 18930589..18930678 206..117 450 100 Minus
3L 28110227 3L 18930064..18930151 291..204 440 100 Minus
3L 28110227 3L 18924703..18924775 531..459 365 100 Minus
3L 28110227 3L 18926178..18926241 460..397 320 100 Minus
Blast to na_te.dros performed 2014-11-27 00:30:56
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 5326..5410 183..97 123 63.2 Minus

UFO09986.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:51 Download gff for UFO09986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32204-RB 492..1557 9..1061 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:29 Download gff for UFO09986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32204-RB 494..1559 9..1061 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:45 Download gff for UFO09986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG32204-RB 494..1559 9..1061 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:45 Download gff for UFO09986.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 18930591..18930678 117..204 100 <- Minus
3L 18932758..18932865 9..116 100   Minus
3L 18923863..18924392 531..1047 96 <- Minus
3L 18924704..18924775 459..530 100 <- Minus
3L 18926180..18926239 399..458 100 <- Minus
3L 18928150..18928257 291..398 100 <- Minus
3L 18930065..18930150 205..290 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:29 Download gff for UFO09986.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18923165..18923250 205..290 100 <- Minus
arm_3L 18923691..18923778 117..204 100 <- Minus
arm_3L 18925858..18925965 9..116 100   Minus
arm_3L 18917804..18917875 459..530 100 <- Minus
arm_3L 18919280..18919339 399..458 100 <- Minus
arm_3L 18921250..18921357 291..398 100 <- Minus
arm_3L 18916963..18917492 531..1047 96 <- Minus