UFO09989.5prime Sequence
1056 bp (846 high quality bases) assembled on 2011-10-17
> UFO09989.5prime
CAGTCGACATGGAGGATGACTTGGAGTTTCTTATCAACGCCCTGTCGGTG
CCAAACACTCCACTCACCGAACCCTACGATGAGGGGCAACTTCTAGAGAT
GCGTGAATCCTTCAAGACGCTGCAGAAGCTCCTGCGGCGCAGTTCGCTGC
CCGTAGAGGAGAGTCTGCGTTCCATGCCGAGATCGAAAGCTGGAGGTCAA
CTGGAGGCATTGCCATCCTTGCTGCCTATTGTGGACAACAATTACGAGAG
GACCAGCGATAAGGCGTGGAACTCGGCGGAAAGCGGAGCCCGTTCGTCGC
CCATCATTTCGGAGTGCGGCCTGGGTGATTGGGATAAGGAGGATCCTTCA
GATCCTTCAGATAGGGCACTGGTGCCCTACGAGGAACTGGGCAATGAGCG
AAGCAGTTCGGACACCACAATCACCAGCCGTAGCTTCGCATCGTCGGGAA
TCTCGCTCAGCATACCTGTTCACTTGGTATGGAACAACAAAGAGTACAAT
CAGGAGAGCACGGACAGTGAAACTACACTTATAGCGGACGGGCGCAGATA
CAGTATTACAAATGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
ACGCCCGGCGGCAACCGAGCGTTTCTGAACAAATCCAGATGGAGTTCTGA
GGTCATTACTGGATCTATCAACAGGAGTCCAAAGCGAGCTCGAAATCAAA
TTACGCCCCCGCCCTGCCACTCATCGCAGTACTGTGGTAATCATTAAGTC
TTCTGCCGACAGGAAAGCCATCACAAACGCATGATGAACCTGAATCGCCA
GCGCCATCAGCACCCTTGTCGCTTGCGTATATTATTTGCCCATGGTGAAA
CGGGGGCGAAGAGTTGTCCATATTGGCCCCCGTTTAATCAAACTGGGTGA
AACTCACCCCGGGATGGCCTGAAACAAAAACACTTCTCTCAATAAACCCT
TAGGGA
UFO09989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6138-RA | 758 | CG6138-RA | 128..683 | 8..563 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10567382..10567937 | 8..563 | 2780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:31:14 has no hits.
UFO09989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:53 Download gff for
UFO09989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6138-RA | 89..653 | 1..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:40 Download gff for
UFO09989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6138-RA | 124..688 | 1..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:08:53 Download gff for
UFO09989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6138-RA | 124..688 | 1..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:08:53 Download gff for
UFO09989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10567378..10567942 | 1..569 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:40 Download gff for
UFO09989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10567378..10567942 | 1..569 | 98 | == | Plus |
