UFO10002.5prime Sequence
1049 bp (919 high quality bases) assembled on 2011-10-19
> UFO10002.5prime
CAGTCGACATGTGCAATCCAGGAATGTGCTCGATGCCCGGCACTTGCTGT
GGACCGACTGGCGGACTGGGACCCTGCCTGCTCTGCGGACCCTACAATGG
CCAGTGGTTCCGTTCGGTCAACCACTGTTGCGGTCCTTGTGGCCCATATG
GTTGCTGCTCATGCTACGGGCCGTATGGTGGACATTGTGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTG
GCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCAGAGAC
GAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCAC
CGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCG
TCGTGTATCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCATGAAAACG
TGTACAAGGTGACACTATCCCATATCACAGCTCACGTCTTTCATGCATAC
GAATCCGATGAGCATCATCAGCGGCAGATGTGATAAGCCGATAACTGGTA
TTCTACGCTAAAGCTAATCAGTGACGCGTAAGTAGGCACTGCGATGCTAT
GCTACAGCTGAATCACGGGACAGATTTCCATACTCTACGAACATCAATAA
TACATATCGTCGATTGAGCCACGACATGACTCCGAAGCACGATGAATGC
UFO10002.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34168-RA | 492 | CG34168-RA | 118..297 | 9..188 | 900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16134909..16135088 | 188..9 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:10 has no hits.
UFO10002.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:08 Download gff for
UFO10002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34168-RA | 83..266 | 9..194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:25 Download gff for
UFO10002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34168-RA | 118..301 | 9..194 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:13 Download gff for
UFO10002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34168-RA | 118..301 | 9..194 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:13 Download gff for
UFO10002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16134909..16135088 | 9..188 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:25 Download gff for
UFO10002.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16134909..16135088 | 9..188 | 100 | | Minus |
