UFO10006.5prime Sequence
886 bp (835 high quality bases) assembled on 2011-10-19
> UFO10006.5prime
CAGTCGACATGATCCACAAGAGCATAGCCCACCTGCTGGGACTGGCAGTG
ATCATGTTAATGATGTGGAAGCCCACACCCACGGATAGCTACGCCGTGGG
ACAATCGAAGTACGGCAGGATCGAGAAGTTCCCCTACCAGGTGATGCTCA
TCGGCAAGCAGCTATGGCGCAAACGGATTCTGTGCGGCGGCACACTGCTG
GACAAACGTTGGATCCTAACAGCTGGACACTGCACCATGGGCGTGACCCA
CTACGATGTGTATCTGGGCACCAAGAGCGTGGAGGATACGGAGGTGTCCG
GCGGTCTGGTGCTCCGCTCCAACAAGTTCATCGTGCACGAACGTTTCAAT
CCGGAGACGGCGGCCAATGATATTGCGCTGGTCAAGCTGCCGCAGGATGT
GGCATTCACACCGCGAATTCAGCCCGCCTCGCTGCCAAGCAGATATCGAC
ATGACCAGTTCGCGGGCATGAGCGTGGTGGCCAGCGGATGGGGCGCCATG
GTGGAGATGACCAACTCGGACTCGATGCAGTACACCGAGCTGAAGGTGAT
CTCAAATGCGGAGTGCGCCCAGGATTACGATGTGGTCACGTCGGGAGTGA
TCTGTGCCAAGGGCCTGAAGGATGAGACAGTGTGCACTGGTGACTCTGGC
GGTCCACTCGTTCTCAAGGACACTCAAATAGTGGTGGGCATAACCAGTTT
CGGGCCAGCCGATGGTTGTGAGACCAATATTCCCGGAGGCTTCACCCGCG
TCACACACTATCTGGACTGGATCGAGAGCAAGATTGGTAGCCATGGCCAA
GTACATCAGCAGTACCTGCGACCACAGCAGCAACATTCACACTTAGTTAA
TATGTCTTCGCTCCGACTCGGGGTGGGAACACACCG
UFO10006.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11529-RA | 1240 | CG11529-RA | 117..944 | 9..836 | 4125 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12197907..12198734 | 9..836 | 4125 | 99.9 | Plus |
Blast to na_te.dros performed 2014-11-27 00:34:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2574..2668 | 757..844 | 125 | 64.2 | Plus |
UFO10006.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:11 Download gff for
UFO10006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..947 | 9..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:43 Download gff for
UFO10006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..947 | 9..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:26 Download gff for
UFO10006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11529-RA | 117..947 | 9..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:26 Download gff for
UFO10006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12197907..12198737 | 9..840 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:43 Download gff for
UFO10006.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12191007..12191837 | 9..840 | 99 | | Plus |
