UFO10010.5prime Sequence
1084 bp (935 high quality bases) assembled on 2011-10-19
> UFO10010.5prime
CAGTCGACATGCATAACAACAGCTGTTTAGAACCCATGGACAGGACCAAG
ACTACGAAACTTCCTCAGCTCAAGTCCAGCGTTACTCCCTACAGACCAAA
GCCGAACCTAATCCGTAGTGATTCCCCGAAATTAGAGAACGATAAGCGTA
ATGGGCTGGACTTGGAGCTTCTGGATAATCCAGAGATACCGAGCGTAAAG
CGAGTACGATGGGCTCCGATGTATGGGGAAAGGAGCCCGAGTAAGACCGG
CTTTACCAGCGTTCCACTAAGCTCCAAAAAGGCGCAGTTTGATCATGATA
CGACAGATGAGTTAATACTGGCTAACGAGCTTCGATTAGCGGTGCATCGT
GGGGGAGGTTCCATAGATCCCGACAAGAACTACGAGCTGAGGGCTCGACT
GTCGCCCTTGCAATTGCCGTACAGTCGAGTGCAGCGAATTCTGAAGGAGT
GCGAGTTGAGCGAGAGGAATCATCACACCTATAGTATACCCATGGACTAT
GGGCGGCAATTGGTTGCCATGGTTTGCAAGATCAGGACGGATAATCTCCC
CGAACTGAAACTTCGCTTGGCCTCCTTACTGCGGCAAAACAAAGCGCGCT
TCTTCAATCGACATTTATTCAACGAAACTGGCTTGATTGAGGCCACATTG
CCGAGCGTAACACCATTAAGCTTTGAGGAATTCAATCAAACGTTGCGAAT
TGATGCTTTGTGGTGCAAAGCCACCGATAGTACCATTACCGATTTGGCCA
AAGGATCTGTTTTGTTCAAATGTCGGCCTCTGGACCTGCAAGAGGTCGCG
TACAAACTCACGCAGTGCAACTACAAGATTGTACATAACGAGGTTGGACA
CTGTCCAAACAAGCCGCTCGTCGAGTTAAATGATCGTCAAATGCCCCACT
TCTCAGGAGTTTCGTAAAAACCTTCTTCAAGACATAGATTGTCGTAAAGA
TCTATGACCATGTGCGTGTCAAGCAGCTTTCTTAGACCAGTCGGTTTGGC
GCGCGGGCCAGGGTAGTGGTCATAATCCATAATCATAATCATATCTAAAT
CACACTAGCCCTAGGGAATCTGTCATGACTATGC
UFO10010.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:34:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31244-RA | 1138 | CG31244-RA | 86..1045 | 9..970 | 4670 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:34:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19397523..19398482 | 970..9 | 4620 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:34:02 has no hits.
UFO10010.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:07 Download gff for
UFO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1053 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:26:22 Download gff for
UFO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1053 | 1..979 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:10 Download gff for
UFO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31244-RA | 78..1053 | 1..979 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:10 Download gff for
UFO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19397515..19398490 | 1..979 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:26:22 Download gff for
UFO10010.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15223237..15224212 | 1..979 | 98 | | Minus |
