Clone UFO10017 Report

Search the DGRC for UFO10017

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:100
Well:17
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG15609-RG
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10017.5prime Sequence

1071 bp (972 high quality bases) assembled on 2011-10-19

> UFO10017.5prime
CAGTCGACATGGCCAGCGTATGGAAGCGATTGCAGCGCAATTTCAAGCGA
GCCGCCAAATTCCAGTTCACCGCATCGTACCACGATCTGCATCTGGAAAC
CACCGCCAAGTGGCGGCCGTCGAACCTCTCTATCGTTTGGACCAGAAGAT
CTAGACGAGTGGCCAGTGCTCCTTTGCCATGGGAGCCGGACATGATGAAC
CCCTTGGTGGGCAATATATCCTGGCCAGTGCCCGACAATCACACCATATC
CGTCACCCTGTTTAAGGATCCTCGGACACACGAGCTGGAGGACAAGGACT
GGACGTTTGTCATCGAAGATGTCACTCCAATGGGCAAGAAACGTGTGCTG
GCCAATGCCAGCATTAATATGAGGAAGTATGCCAGCATAGAATCCACTCA
GCAGAGCTTTACCTTGAGCCTAAAGCCAGTCTCGAAGAAGATTACTGCAG
CCAGTTTGGAGCTCACGATTAGCTGTGTATTTTTGCGAGAAGGAAAGGCT
ACAGACGAGGACATGCAGAGCGTTGTCTCCATGATGTCCGTGAACAACAA
TGATGTGGCGCCTTTGGATGACTTGGAGGATATTCCAGATCTTGATGGCT
TTAGTGAAATTACGGACAATTTTAATGACTTTACACAGCAACTGGAGCAT
ATGACAACTAGCCTAAATGGCTGCATTGATGTGGCCACGCCTCAAAGTGA
CGCCGACGGCAAGCGGGAAGCTGCTAACAAGTTAGACTTGCCCACAGCTG
CATCCGGTGGTTCTAGTGGTGCTGAAGAGTCCCTGAAAACGCCGAATGGA
TTGCAGCATGTGGTGGACCAAACGCCAATAAAGTCACCAGATGAAGTAAA
GCAGCCAAAGCAGACGCCGGTGGAGTCATTGAGTCCAAAACCGACGAGGA
CTTTGACAATGGTCACCTCACGCACTCGACCACGTAACAGATGATGTGAG
CAAGAGAGAGCTTATCTCCTGAAGAGATGACAGACTAGTGAAGTGTGAGA
GTCACAGACTTCGGACACGCCTGCACAGCTGACTCTAGCACTATGCTGAC
TGATAGTGCTGACAGTCAATT

UFO10017.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:35:46
Subject Length Description Subject Range Query Range Score Percent Strand
Ehbp1-RG 3829 CG15609-RG 383..1308 9..929 4485 99.2 Plus
Ehbp1-RF 4361 CG15609-RF 387..1077 9..699 3455 100 Plus
Ehbp1-RI 4152 CG15609-RI 387..1077 9..699 3455 100 Plus
Ehbp1-RF 4361 CG15609-RF 1143..1378 699..929 1035 97 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:35:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17013787..17013997 322..112 1055 100 Minus
2R 25286936 2R 17013285..17013481 699..503 985 100 Minus
2R 25286936 2R 17012498..17012709 909..699 980 98.6 Minus
2R 25286936 2R 17013546..17013727 502..321 910 100 Minus
2R 25286936 2R 17014948..17015052 113..9 525 100 Minus
Blast to na_te.dros performed 2014-11-27 00:35:45
Subject Length Description Subject Range Query Range Score Percent Strand
micropia 5461 micropia DMDM11 5461bp 339..379 846..886 124 78 Plus
micropia 5461 micropia DMDM11 5461bp 5324..5364 846..886 124 78 Plus

UFO10017.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:16 Download gff for UFO10017.5prime
Subject Subject Range Query Range Percent Splice Strand
CG15609-RG 375..1300 9..929 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:17 Download gff for UFO10017.5prime
Subject Subject Range Query Range Percent Splice Strand
Ehbp1-RG 383..1308 9..929 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:10:56 Download gff for UFO10017.5prime
Subject Subject Range Query Range Percent Splice Strand
Ehbp1-RG 383..1308 9..929 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:10:56 Download gff for UFO10017.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 17013546..17013727 321..502 100 <- Minus
2R 17013789..17013996 113..320 100 <- Minus
2R 17014949..17015052 9..112 100   Minus
2R 17012474..17012708 700..929 97 <- Minus
2R 17013285..17013481 503..699 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:17 Download gff for UFO10017.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12901051..12901232 321..502 100 <- Minus
arm_2R 12901294..12901501 113..320 100 <- Minus
arm_2R 12902454..12902557 9..112 100   Minus
arm_2R 12899979..12900213 700..929 97 <- Minus
arm_2R 12900790..12900986 503..699 100 <- Minus