UFO10021.5prime Sequence
1084 bp (962 high quality bases) assembled on 2011-10-19
> UFO10021.5prime
CAGTCGACATGTCTATGGCTAAATACCTAAACCGATCCGTTGGAAAAGCT
GGCAAGGATGTGGCCGCCAGGATATGCACCCTTAAACCCACTGAGCCGGA
ACACCATTCTATACACCTGACCGCTGGGGAGAATTTCGTGGGACGCAGCC
GGGAGACCGGCATCCGAGATTCCAAGTGCTCGAAGCGACAGATTCAACTG
CAAGTGGACCTAAAAAAGGCTGTAGTTTCACTTAAAGTCCTGGGAGTTAA
TCCCTGCGGCGTCAATGGTCTGATGCTTATGCAGAACGGGGAACGCGAGC
TGAAGCACGGAGACTTGGTGGAGATCGTTTACGGCAGGCATCAGTTCGAG
GTCGTCTTTAACCCTCCACCGGAGTATGACAAGGAGAAAGCTGAGCCGTT
GTCCACAACACTATCACCGTCAGAGAAATCCGAGAGGTGGGACTCATCTG
GCAATGGTAAGCTGGTTATCTTTACCAGCGTCGGCGTTAAAGGTTCTGAA
AAGATAGCTGGCTACGACATGGACGGCACCATTATAAAAACAAAATCGGG
ACTGGTGTTCCCCAAAAACACCGACGACTGGCAGATCATATTTCCCGAAG
TGCCGGAGAAACTAAAGAATCTCCACAAGGATGGGTTTAAAATCTGTCTC
TTCACCAACCAAGGAGGCATTGCTCGTGGAAAAATCAACCTAGATGACTT
TAAGGTCAAGATCAAGCATATTGTGGCTAAACTGGGAGTTCCAATTCAAG
TATTTATAGCCATAGGTGATGGATTTTATCGCAAACCTTTGACGGGAATG
TGGCAGCACTTAAAGAGTGAAATGAATGATGGCGTTGAGATTCAGAAGAT
CGATGTTTCTTCGTCGGCGATGCAGCCGGAGACCGGAGACGGCAATGGAG
CCACCAAGCGCGCCAAAGATCACTCTTTAGTAGACAGACTTTTGCAGCAC
GTGGGATTTCATCTACACTCCAGAAGTCATTTCTGGGCAACAAGTGGAGC
ATGGAATAGCGACTTTGACCACTACCGTCAGACAGTTTCTCTGCTGATCG
ATGACTGACCCTCGATGAACACCCTGCAAATGTT
UFO10021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:36:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9601-RA | 1856 | CG9601-RA | 75..1165 | 9..1074 | 4760 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8342505..8343442 | 943..9 | 4480 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:36:18 has no hits.
UFO10021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:19 Download gff for
UFO10021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9601-RA | 56..1080 | 9..1018 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:27:35 Download gff for
UFO10021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9601-RA | 75..1099 | 9..1018 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:06 Download gff for
UFO10021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9601-RA | 75..1099 | 9..1018 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:06 Download gff for
UFO10021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8342418..8343442 | 9..1018 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:27:35 Download gff for
UFO10021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4168140..4169164 | 9..1018 | 98 | | Minus |
