UFO10032.5prime Sequence
1089 bp (988 high quality bases) assembled on 2011-10-19
> UFO10032.5prime
CAGTCGACATGGCGAAGAAGTTTAGTAACATAATATTCTATCTGACCCTG
ATAATCATAGCCATCTGTGTGGCCTGTATCTGGATGTTCTCGGGCTTCCG
TCACGAATATGGCAAATTCAACATGATCCTGGTTGCCTTCTTGGCCGTTA
CTTTACTTCAGATCCTAATCTTTACGCCCATTAAGTTCACAATTATGTCG
CTGGATGCCGCCTTCTGGCCGGCCCACCAAGCACCGGAGACTCCCGACGA
GAATGCCAATGTGGACACGTTCATGGACAATCTCAGACTGCGCCTCCGGA
CGCTGCGGAGTGAGCTGATGATCACGGAGAGGCATCGGAACGAGAGGGTC
AACCTGAAGTATCGCCTGATTACCGAGGAACTTTGGCTCACGGGCAAGCT
GTTCCTGGTTTACTTCTTCATGGCCTTGGCTTTCTTCGATGAGTTGCTGT
ACTTTAACACAGAGGCCACGGAGTTACTGTTCCAATGTAATCATGGGGAT
GCGTTCGGACTATTGAGTGTGGGGGATGTGCCGGATATATATTTTTTTGT
GGTGTCCTCGTTAGTGCTGGCCTTTACGGATGGTAAGAACACCAGTGGCG
GAGCTCCTTGGATCCATGCGGAGGGCACTAGACTACTGGGCGTGGTGAGA
CTGAGGCAGCTGAGGACAGAGAGCAACCGATTGGGTCTATCGCTTCCTGT
GTTCACTGAGCGGGACTTTTCGGAGAGCTGGACACTGCCCTACGAAAGGG
TTCCCTATACGGACAAGTACTGGCCCATCTACACACCCTGGCTGCCCAGT
GTTTCTGTTGCTCGGGACACCTACTTATGGGCATTAACCACGTGGGGCAC
ATGTTCAACTATCCGGAATCGAATGGCTACAAGGTACTGCTCTCGGACAC
CCCGCCACAAAAGCCTGAAAATTATTGATTACTGGATGAAGAAAACTGGC
TGGATGCGATACGACCGCTTTGTCCATGGATTTCAGCTGTACAACGCGGA
TGCCAACACCTTTAACGTGGTGCACCTTGTGGGTGGAAAAAGTTCCCTAC
AGTATCTGATGCCCACGAGGATCGAAGTCACCCTTGGTG
UFO10032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| brv1-RA | 2673 | CG9472-RA | 30..1118 | 9..1089 | 5020 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19485436..19486469 | 1040..9 | 4805 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:37:38 has no hits.
UFO10032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:26 Download gff for
UFO10032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9472-RA | 25..1118 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:17 Download gff for
UFO10032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brv1-RA | 25..1118 | 1..1089 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:39 Download gff for
UFO10032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| brv1-RA | 25..1118 | 1..1089 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:39 Download gff for
UFO10032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19485381..19486474 | 1..1089 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:17 Download gff for
UFO10032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19478481..19479574 | 1..1089 | 97 | | Minus |
