UFO10033.5prime Sequence
1085 bp (971 high quality bases) assembled on 2011-10-19
> UFO10033.5prime
CAGTCGACATGAAAACGACAATCGTGGAGGAGAGGAGTGTGAATGAAACG
ATAGAAACAATAGCCACGAGCAGTGGCTCCGTCCAGGAGACAATCGAGAT
CGTGAATATCGATGGATCTGTAGCACCAAAGCATCGTCACCATCATCACC
ATCACAGACATCATCATCACCATGAAAGGCAGGAAAATGTTGAAGTTGTG
GCAACAGAGGAAGTGATTCTTGTGGAGAACGCACCGAAATCGAGGAAGCA
TCACCACCACAAGCAGAGGACTTCTCCACCACCGCCCCTGCCGCAAACCT
CACCACCATTCCTCACCCCCACTGAAGAAGTGGGTTTCAATGTGGTGTGG
GAACCCCAGGCCTTTTGGAACCAGCCCTCACCCAATCCCTCCACTGATCT
AGATCTCTCACAGGATAACGAGGTTGTCGATGCAGTGGAGACTATGGACA
CTACTTCAGCTTCCGATGAATTCACCACTGTTGTTTTTCAATCAGAGACA
AAGGAGTCTATTAGGGAAACACAGAAGCACACTAGAGTGGTGGAGGAGGA
AATAATAATTGATCAATTGGACCCACCACCCTATGCACCACCGCCACTTC
AAGTGCAGACAGGATTCTTTCCAGTGGCTCAGCAGCCCCCACTTTCACCC
ATCGCAGAAGTGGTGCAAACAGATGTGGTGGCGGAATCGGTGGAACCTCC
ACTACCGCCTACAGGTTATATTCCCAGAATAAATCTAAAGCCAACGGAAA
CTATTGTCGAGAATGTCGAGGTCATCGTGCCCGCACAAATTCAACAAGAG
CCGGAGTTTATTCCGCAGCCGGGATTTGTGGCCAGAATTGTGGAGAACAT
AGAAGTTGCCGCAGCATCTAAGTCATCACTGGTTTCACCTCAAAAGAGTT
ATTATCCTCGGACAGCATGGTGAGACGATTGTGGAAGATATTGAAGTGGT
AAAGATGATGCTCCTGTTCAGAGTGGTTATATTCCCGAAATGTTGAGTGC
ATCGACTTGTGAAAATATAGATGCGATTCCTCCCTTTCTTCTTCCACCAT
GATCGCTACTGAATGAGTCAATCGTGAACTGAAGT
UFO10033.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30480-RB | 3460 | CG30480-RB | 49..1125 | 9..1076 | 4990 | 98.3 | Plus |
| CG30480-RA | 2966 | CG30480-RA | 49..1125 | 9..1076 | 4990 | 98.3 | Plus |
| CG30479-RB | 3460 | CG30479-RB | 49..1125 | 9..1076 | 4990 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14677043..14678088 | 1048..9 | 4800 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:37:47 has no hits.
UFO10033.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:27 Download gff for
UFO10033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30480-RA | 39..1109 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:23 Download gff for
UFO10033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30480-RA | 42..1112 | 1..1062 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:43 Download gff for
UFO10033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30479-RB | 42..1112 | 1..1062 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:43 Download gff for
UFO10033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14677022..14678095 | 1..1067 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:23 Download gff for
UFO10033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10564527..10565600 | 1..1067 | 98 | | Minus |
