UFO10037.5prime Sequence
1105 bp (974 high quality bases) assembled on 2011-10-19
> UFO10037.5prime
CAGTCGACATGCCGCCGAAAGTGAAGAAGGAGAAGAAGGATGTGAACAAG
GTGACCCAGGTGGACAGAACCTTCTACGAGCTGACCATCACGGATCTCAA
CCAGAAACTAGCTCGACTGCGATCCCACGTGACCACCGTCGATGAGTCCA
ACATCACGCTGACCGAGAAACTCAAGGAAGTGGAGGCCGATGGCGTCGAC
GTGGCCGCTCACTTGGAACGCACCCTGGCGGAGAGGAATAACTCGATCAC
CGAACTGGAGGAGCGCCTGGTAGAGATCACCAAGGTGCGGGATGTGGAGA
ACCGCGTGGCACAGGAGAAGATCGGCGACTTGGAGTCGAAATACAAGGCC
ATGCACGACCAGTTGACCTCCGAAATAAAGCTGCTTAATGGCAAGCTGAA
TTCCCTCGACGAGTTCCGCATCCAGAGGGATGTCCTGTTGGCCAAGTTCG
ATGAGCAGGAGGCGGATCTCAATGAGCGCGAGAAGGATCACAAGGAGGCG
CTCTATAATATGGAACAACGAGCTGTGGTGGAGAAGGATGCGCTAAAAAA
GGAGGTCGAACAGAAGCTGCTGCAAGTTTCCGAGGACTTCACCCGGTCCA
GTGAGATCCGCAACGCTGGCTACACCCGCCGCCTGATTCGTGAGAACATA
GCCCTGCAAAAGGAGATCGATCTACTGGTCATGTCCCAGATAAAACTGCA
GCAGGCATATACCAACCAGAAGTCCAAGCACAAGGAGATGGAGGAGCAGT
ACAGTGCCCTCGATCAAATCAAAAACGAGCTGGTCCGCAACTCCGTGAAC
AAGATCAAAATCATTGAGGGTCTGACCAGGAACTACGAGAAACTGAAAGC
CAAGTACGTGGAGGTACTGCGCTACAGAACGGACTATGAATCCCTTCTCC
AAGCTGAAAGGGCGAGAATGTAAGTAAAAGGATGCGGCCGGAAACTCCGA
CCCTGCCAAGCGAATGGAGATTTTGGATCTGGACATCGAAATCTGGAGGT
GGTCCATGCCCAGCACGTGATCGGAGATACCTCGACTGCTGGGGTCAATC
AGAAATCAGTGCACTGTGCGGATGCGAATTGTGGCGACCAGCAGCAGATT
CCGAA
UFO10037.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17122-RA | 1947 | CG17122-RA | 82..1167 | 9..1086 | 4960 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20274234..20275254 | 1023..9 | 4700 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:38:18 has no hits.
UFO10037.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:29 Download gff for
UFO10037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 82..1178 | 9..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:46 Download gff for
UFO10037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 82..1178 | 9..1095 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:58 Download gff for
UFO10037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17122-RA | 82..1178 | 9..1095 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:58 Download gff for
UFO10037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20274158..20275254 | 9..1095 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:46 Download gff for
UFO10037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20267258..20268354 | 9..1095 | 97 | | Minus |
