UFO10038.5prime Sequence
1082 bp (958 high quality bases) assembled on 2011-10-19
> UFO10038.5prime
CAGTCGACATGGAGAACTTTGGTATCGCACATGCCCTGCTCCAGCTACTG
CTGCTCCATCTGGTGGGAAGTGGTCGAGGTCACCTGCTAACTGGTCAACC
GGCCATTGACCTGCGCATCCAGGCACGGGAGCAGCTGATCTCGCAGTCCA
ATGACAGCGCCTATGTCCAGCGACTGATGCGTCTGTCCAAGTCCGCCGAA
ATGCGCAGCTATATGCAGCAGGACGCGGATGCCTGCGAAAACTTCTACGA
CTACAGCTGCGGAAATTGGCCCCAGATCAATCCGGCCAACGATGCCTATC
CCCGGGAGACGAACTTCGTGCAGCTGCTGCTCAAGGCCTATAGCCACAAG
CAGCAGCGTCTAATGGAGCAGCCGGCGAACGTGGAAACGGATGAGGTGGC
CGTGCTCCGACTGAAGGAGTTCTATGCCAGTTGCCTGCTCTTTCGACAGG
TACCGGAGGATCTCTACAGACGTCAGTTGCAGGAAATTGTGGCTGATTTC
GGACGCATGCCCGTCCTAAGTCTCCCGGGTCAGGAGTGGCCAGCCGAGGA
GTTCGATTGGCTGGACACAGTGGCGCGAATAAAGCGGCAGTACGGCTTTG
ACATCCTTTTGCTCTTTCAGCAGTCGGCGGATCGCATATACGTGGGACAG
CCGAAGCAGATTCTTCCGGAGGCCAACAGAAAGGCCGTGGCAGAAGATAT
AGCCAATCATTTGGAACGTCACTTGGGTGTGGATCCCAAAGTGGCCGTAA
CAACGGCAAGGGAAATTACAGAGTTTGAGCAAAAGATTGCCGCCATTATG
GTGGATCGTCGAGTTGGAGTGATGTCCAATTTGTACACTCCAAGTGACGC
GGACTACGTTGATGTCTCAAAACTCACCCAGTTCGTGCAACTGTCCTTGA
CCGGGAGTTGTTGGCCAACGTGTCCCTATATCCGCATGTTCCTGATTATC
TTTATGAAAATAGATGAGCTGGTGACGGAGACACCCACCACACCGTACTG
CTAACTATGTCTTCATGGAGCTTTAAGCACTTCTACTTACGAGCGAGGGA
TCGTTGGGGGAGCATGCGTCAGTCGGTCAGAA
UFO10038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14523-RA | 2099 | CG14523-RA | 22..1097 | 4..1076 | 4970 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28879067..28880101 | 1037..4 | 4775 | 98.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:38:26 has no hits.
UFO10038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:30 Download gff for
UFO10038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14523-RA | 137..1221 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:52 Download gff for
UFO10038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14523-RA | 18..1102 | 1..1082 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:01 Download gff for
UFO10038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14523-RA | 18..1102 | 1..1082 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:01 Download gff for
UFO10038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28879018..28880100 | 1..1082 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:52 Download gff for
UFO10038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24704740..24705822 | 1..1082 | 97 | | Minus |
