UFO10046.5prime Sequence
1061 bp (939 high quality bases) assembled on 2011-10-19
> UFO10046.5prime
CAGTCGACATGTCCGAGAAAAACCTGAAAGTGGGCGCCCGGGTCGAGCTG
ACCGGCAAGGATCTGCTTGGCACGGTTGCCTACGTGGGGATGACCAGCTT
CGCCGTCGGCAAGTGGGTGGGCGTCGTGCTGGACGAGCCGAAGGGCAAAA
ACAGCGGCTCCATCAAGGGCCAGCAGTACTTCCAGTGCGATGAGAACTGT
GGCATGTTTGTGCGACCCACGCAGCTGCGTCTGCTGGAGGCTGCTCCTGG
CAGCAGGCGCAGCATCGAGGATGTCAGCGGGGCTACGCCCACGGCTGCCC
AACCCACAAAGGCGCGGCTGAGCAGCTCTCGCACCTCGCTCTCCTCCAGT
CGCCAATCGCTGCTGGGTTCCCGCACCCAGTTGACCACTTCTCTGAGTGA
ACGCACTGCCTCCAGCAGCAGTATTGGCCCGAGGAAATCTTTGGCGCCGC
AAAACAGCAAGGATAAGGAGTCCCCCAGCACTTCATTGGCAGAAGGAGCC
CCAGCAGCAAGCGGTGGCAACGGTGCCGCTTCGCATGCCTCCTCCAAACG
GGCTTCCTTCGTGGAGACGGGCTTCCTTGAAATTCTTAAGCCGCAGTTCA
CGCCTTCCCAGCCACTGCGATCGCCCTCTTTCACCATGCCCTCCAACTCC
GGTGCTGAAGACAAGGTCGCCCTGCTGGAGGCACAGAAAACGAGCGCCGA
GCTGCAGGCTCAGCTGGCTGATCTCACCGAGAAGCTGGAAACTTTAAAGC
AGCGCAGAACGAGGATAAAGAAAGGTTGCGGGAGTTCGACAAGATGAAGA
TTCAGTTTGAGCAGCTTCAAGAGTTTCGAACGAAAATCATGGTGCTCAGC
TTCGCTTCAGAAGAGTTACTGCGCGCCAAACAGAGCCAAGATGCAATCGA
GGTCCAGAGCAGCATGCTCAGAAATGGCAGATCTGGCAGACATGTGCAGA
TGATCACGCTGACAAGAAATGCCGAGGAGAGCCGACCGCTGCAGCTGGAG
CTAGAGTCCTCAGACGTATGAAAAATTGGAGTAGATCTGGACTCTTACGC
TCGGAATGCAA
UFO10046.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:37:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gl-RA | 4550 | CG9206-RA | 286..1366 | 5..1061 | 4735 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13929845..13930867 | 5..1011 | 4315 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:37:55 has no hits.
UFO10046.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:27 Download gff for
UFO10046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 281..1362 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:30 Download gff for
UFO10046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 283..1364 | 1..1059 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:47 Download gff for
UFO10046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gl-RA | 283..1364 | 1..1059 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:47 Download gff for
UFO10046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13929842..13930923 | 1..1059 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:30 Download gff for
UFO10046.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13922942..13924023 | 1..1059 | 97 | | Plus |
