UFO10048.5prime Sequence
1082 bp (992 high quality bases) assembled on 2011-10-19
> UFO10048.5prime
CAGTCGACATGGCAAAAAATCCAAAAAAGGAGGAGGACGGCGGTAACGAC
TGGGCCCAAAGTGACGAGGACGACAACTGGGACGATTGGGGCGATGACGA
TGACAAGTTCGTTCACGTGGAGAAGGAACAGCAGCCACAGGAGAAAGTCT
CGAGCAGAAACGACGCAAAAGGAACGGCGGAAAATCAGGAAAAGCTGGAA
ACTCCCAGAATTTCTGCTCCAGCAACAGCATCCGCCACATCCTCGTCCTG
GGGTCTGTGGGGCGGTAAACTGAGCTCCGTGCTAACCACCGCCACGGAGG
GATTGGGCACGATAACCACCCAAGTCAACCAGGGGCTTAATCAAATCATC
GGAGTGCCCGATCCCGAGGAGCTGGCTCGCATTAATGTGGCTGAAAAGGC
GGAAAAGGCTGCTAAAGCGCCGCCAGAGGAAAATGTCGACGATGAAAAAG
AATCTTCGGCCGCCTTTGGCTTGGACTTTGTCACCAATCTGGGCTCCAAG
GTTCTCAACACCGGACTGGATACACTCGAGGGCATTGGCAAGAAGACCAT
GACCATCCCGCAGGACAACGATCCCAAGCTGATGAACAAGAGGAAACTGC
TCGGTCTGGAGGCCAACTCGCCTAATTTGAGTGCCGTGTTGCTGGAGGCA
AAGAAGGAGGCCGACCAAATGGAGCAATCCCTGCAACAGCTACAGCTGAA
AAGACAGAAGGCGCAGCTGCGTTTCGAAATCCTTTTCGAAAATTACTGCG
GCCTGTGCACTTCGAGGCCCTGGAGATCCTTTCCAAGGAGTCACGCCTCA
ACTGGACACCCTACTCGATGCGGTTAGTGGCAATGCCCGTGCAGAGTTGC
AGGAAACGATAAACGAGGTGAAGGACTGATCGAACTGGAGGATCTGGATG
TGGAGAGTGAAGGTGACTACGAGGCGGAGGACCTGAGCGAGCGATTGGCG
GCCATAATCAAGGACGCCGAGCTGGGCCATTCAGTTTGACGACCTAGCCA
ATCACTGGACGCCAGTCCCTCACCTGATGTCAGCTAGACTAGCTGACTGA
CATGCTAGTGAGTACGACACGATGTGCATGCA
UFO10048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:38:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9590-RA | 1578 | CG9590-RA | 62..1080 | 9..1026 | 4905 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:38:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15786764..15787758 | 9..1001 | 4720 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:38:10 has no hits.
UFO10048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:29 Download gff for
UFO10048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9590-RA | 64..1082 | 9..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:28:40 Download gff for
UFO10048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9590-RA | 62..1080 | 9..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:11:53 Download gff for
UFO10048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9590-RA | 62..1080 | 9..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:11:53 Download gff for
UFO10048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15786764..15787758 | 9..1001 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:28:40 Download gff for
UFO10048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11612486..11613480 | 9..1001 | 99 | -> | Plus |
