UFO10053.5prime Sequence
1084 bp (973 high quality bases) assembled on 2011-10-19
> UFO10053.5prime
CAGTCGACATGGAGCAGCGCGCCAACTTTCTGGCTCTGACCCTCCTGGAC
GCCCTGGAGGACGAGAACGAGGCTGATATAATGTCGATGCTGGAGAGGAA
CAGCATAAATGCTGGCATCGTGCCCTGCGATCGAGGACTGGCTCCCTTGC
ACTACGTGTGCGGCATGCGAAACGGGGGACTGGCCCAGCGAATCCTGGAG
CGGTTTCTCGAGTGCCCCGACCTCGACGTGAATGCCTTGTGCGACGGCCA
GACCACGGCGCTGCACATCGCTAGCATTTATGGGCGGACGGAACTGGTTA
GGATGCTGCTGGAGCGCGGAGCTTGCGCGGACCTGGCTGATGAGGATAAT
AAGCTGCCAGTTCACTACGCCATTGAAGAGTGCCACTTTGAGGTGCTGCA
GCTGCTCCGGGATCACATCTTCCGCGAGAGGCAGATCCAGAAAAAGCAGC
AACAGCGAGTCCAGGTGGTTGACGCTCTAACCCCCAATCAGCCTAGGTAC
AATCACGATGTAACTTCCCCGTACTATATTAATATCACTCACAGGCGGCA
TCGACCGCAGCCGAAGTTTCCGGAGCCAACGGAGGTGGAGTGCGCCGACA
TTCCACCCCTGCCCGATGAGGAGTCTGTGAACCTGTTTGCCCTCACTGAA
GCTCACCTTACCCAACTCATCCAGAGCCAACGGCAGAACCAGCCGGAAGA
TCCTTGTCAGCCAAAGCGGCGAACTCTTATTGAAAGCTGGCGTGAGAAGG
TGGAACGCTCGCGCGCCCGCCAGTCCCTGTTCCATCAGTACGATGAGCAT
GTGGAAGCGATGGTGGATGATGCTATTAGTCAGGAGGACTTCAACTATAA
AGGAGCACCTGCAGAAAAAGCTCAGAGACGAGGACAATTCGTAAGAATCT
GACAGAGGATGCACCCACTCGGGTCGTCAAGTGTTCGAGATGCTAGCTGA
GCAAGTCTCTCAGGCTGTCGTCGTGAGCGGAACCGGAGCCACGTTTCTTT
ACAGCCTCAAGGCGACGAGGTGGACGTACGGAAAAGCCTCACCAGCCAGG
ATAGGATAACTTTCTGCAAATCAAGGAAGGCCCT
UFO10053.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8679-RA | 2541 | CG8679-RA | 123..1189 | 9..1077 | 4900 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21217404..21218422 | 1027..9 | 4710 | 98.5 | Minus |
Blast to na_te.dros performed 2014-11-27 00:39:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| opus | 7521 | opus OPUS 7521bp | 6309..6354 | 901..856 | 113 | 71.7 | Minus |
UFO10053.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:38 Download gff for
UFO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 99..1177 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:44 Download gff for
UFO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 116..1194 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:42 Download gff for
UFO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8679-RA | 116..1194 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:42 Download gff for
UFO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21217351..21218427 | 1..1084 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:44 Download gff for
UFO10053.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21217351..21218427 | 1..1084 | 97 | | Minus |
