UFO10059.5prime Sequence
1098 bp (977 high quality bases) assembled on 2011-10-19
> UFO10059.5prime
CAGTCGACATGAATCCAATTATCAAGAAATATCGCCTGAGGCTAAGGAGA
ACTGAACGGGACTCGACCATTGGCTATGTGTTTCGCATCATCCGAATTGT
CATTCTATTGTCTCTCTGGACCGGATCCACGATCATCCTGTTTCTCCACA
AGCCTGAAGAGCTCGCCACGTCGATGGTGACCGTGATGCCCAACAAGACG
GCCTTCCGGAATGTTAAGATGAAGCAGGATTCCGTGGAGATACGCCTGAA
TGGTGCCATAAATGCGTATCTGACTAACCACAGGGTTAGGACATCCAACT
TTTCGGCTGTTGGAGTTCGATTGGAGTGGCGGGATCGAGGAATGAATCGT
AGCCTTTGGCGCACTGGCATGTGGATGGTGTACATGTACAAGGATAAGAA
GAAGTACCTGCAGGTTAATAGGGTCTTTCAGTTCTCCATTTCAGGATGGC
AACAGGAGAGGTCCCTGATCCAGCGTACTTTGCCAACTGATCGTAGTCTT
GAGAACTCCGTCTATGACTGGGCCTTTGCGCAGACGGTGATCTCATTCGA
GAGCATGAGCAAGGATCCGGTGGGTCTGCTCATGACGGTGAACAGCACTC
CGTTGGAGCACGGACTGGGTATACTGTATGCCGCCCTTCTGCTAATCGGT
CTATATGCCATTATTATCTGGGAATTTTCGGACCGTATTCTAAGCACTTT
GCTCATAACAGCTATGTCCCTCGCCCTGCTCACCGTTTTGGGGAGCACGC
CCACTCTGGAAACGATTGTGAGTTGGGTGGACTGGGAGACCATGATGCTC
CTGCTGGGCAATATGATTATAACATCGCGCATGGCAGATACAGGCTTCTT
TGACTACCTGGCCGTGTCGCCTATCGCATCTCCAAGGCCATGCCTGGCTG
CTGATCGGTCTTTTGGGATTCTTCGTGGGATTGACCTCGACTGTGTGACA
ATGCCACCGTGTGCTTCTCCCTCTGCCCACCCGTCATTCGATTGGTGCGA
GGTAATGGACTTGGAGGACCCACCTGTGCTCATCAATTGTTAGCATCTTA
TGCAAATTCGTTGGTCCATAACCCCAGTGGAATTGGCACCCAATACAT
UFO10059.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:39:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13801-RA | 2130 | CG13801-RA | 9..1100 | 8..1096 | 4945 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:39:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2360565..2361573 | 8..1013 | 4680 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:39:35 has no hits.
UFO10059.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:36 Download gff for
UFO10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 1..1051 | 4..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:29:29 Download gff for
UFO10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 1..1051 | 4..1048 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:12:29 Download gff for
UFO10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13801-RA | 1..1051 | 4..1048 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:12:29 Download gff for
UFO10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2360558..2361607 | 1..1048 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:29:29 Download gff for
UFO10059.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2360558..2361607 | 1..1048 | 98 | | Plus |
