UFO10067.5prime Sequence
1077 bp (973 high quality bases) assembled on 2011-10-19
> UFO10067.5prime
CAGTCGACATGTCGCTGCCTCCCGAGGACACCGATTTGTCCACAAATTCC
GCATACGAATCCGCACTCCAAATCGCGAGCAATGTGTCGGCAGCACGAGT
AGTCGGTTCGGCAGTAGGACAGCGATTTTCGCCGTCGCCAGCAGCTCACC
CGAACGTGATTGAGCGCGTCGCGTCTCATGTGGACTCACGCCGCAGCACG
TTTCCAAGTTGGGGTAATCCGTCAGTAGCGCCAAGAGGATCGGAAGAAGC
AGCAGCCAACGCCACAGCAACACAACTCCTATGGGCGGAGAACCAAGGTC
TCCCGACATCGCACTTATTGCCAACTGAACAGGCATTCGAGACATTGAAC
ACTAATGCGTATTGTTCCCCGCCAGGGGATTCACGATTTACGTTCCCTAG
CCAGAACTACTCGCCGCTGCTGCCGCGGTGTGTCCCAGTTCCGAATCAGC
GTTACTCTCCAGATGGATCGCCAATACATCAACTCCATGAGCTGCAAAAT
TGTCCATTGATAGATTCGCCGATAAGACTGCGATTTCCATCCCCCTTGCC
AGAACCACCATCACTACCGACCATCACCCTTACAGTTGATGCCCTGATCG
ATCTTGACCAAAACAACCAGGTCGCATATTATGTCCAGCAGTACAACAAT
CAGCCAGTCCTATATCAACAAAACATTCATATAGGAACGGGAATCCAACT
ATGCGATCAGGCCTCCGAGAATAATCAACCGATTATATTACATATCGTGA
GCACAATCCCCAGACTATAACTGAGAGCCAGGAGCAATTCCACCAGGTTG
TCCCCGAAATTCAAATCAATAATATCCAGGAGCAAGATCAGAAATTTGAA
AATGGCATCTCGGACAAAATCATCCGATTGCAACTGAGCTCAGATCAGAC
TTTACTGAGATCCGGATGAAACCAGATTGTCCTTGCAGTCCAGAAAAAAT
CTCACGCGTGCCTTCTGGAGATTCAGTCCAGACAACGACTACCGAGATCC
AGAGAATGTCTCGAATGCACTCCTCTGTCACATACTGAATATAAGTTACA
AGTCTCAGTTGTAATAGAGATTCCAGG
UFO10067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:40:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ulp1-RA | 5498 | CG12359-RA | 187..1274 | 8..1077 | 4665 | 96.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:40:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19206796..19207760 | 963..8 | 4395 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:40:51 has no hits.
UFO10067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:43 Download gff for
UFO10067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 178..1148 | 1..963 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:23 Download gff for
UFO10067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 178..1148 | 1..963 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:10 Download gff for
UFO10067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ulp1-RA | 181..1151 | 1..963 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:10 Download gff for
UFO10067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19206796..19207764 | 1..963 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:23 Download gff for
UFO10067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19100829..19101797 | 1..963 | 98 | | Minus |
