UFO10069.5prime Sequence
1085 bp (973 high quality bases) assembled on 2011-10-19
> UFO10069.5prime
CAGTCGACATGATTAAAAGTGAAGAAGCCTCCGATCGTTCGGTTATGACC
ATGGATCAGCTGGGTGGCTACTACCACGATCCCCGCGCCCATCCCCCTTT
CAGCCACCCACATGCACACTCCCACCCACATCAACACACCCACACTGGAC
ATCCATATAGAGCTGGGAATCTGTTAACCGGTGGCAATTACCAGGCAATG
GGTGGCGGAGAATCACCCACGGAGCTGATCGATGAGAAACCGAACATCGG
GTATATGGAGCTAAAGCATTATATGGACGCTACGCCCACTGCCACGCCCG
TTTCGGCAGCACAACATTATAGCCTAAGTGCGCTGCACAGCATGGGTACA
CCGCCGGCATCCTCCAGTCCCATACCACCGTACGGGGTTCTAATGACTGC
CCATTCGGCTGGATCCGCTTCTCCGCAATCGAATTCGAAGACGCCCACGG
ATCTGCCGCAGGATTTGCAGTATGCGAGCTCCAGCACATCAACCGCCAAG
GTGCAGCCATTGCAGGTGCAGCTGCAGCCACTCAACCATCAGTACGCGTC
CACCATTAAGTACTGCTCCAACAACACCATACTCAGTGCGAACGACTACC
AATTGCTGACCAGCCAGGAGCAGGCGGGGCAACAGCAGCCGCAGCAGTTG
CCAGCCCAGCAGCTCCAGCATTCACCAGGCGGTGGCTACATGTCGCGCAT
TTCCACATCGCCGTCGCAGGTGATCAGCAATGCGCACGGCATGCCCGTGC
TAAACTACTCCAGCTCGAGTTCCTCGCCTGCCAAGTCGCTCAACGGTTCC
GAATCCTCGCCGCCCAGTCAGAATCATCTGGAGAACAAGTTTCGGGCTCA
GCGGTGGTTGGTACAGTGGCTCCAGTCAGCAGATGCGCCGAGCACTCCGG
ATACCACCAAGAAGTCTAGTACCCGGCGGCCAGAGAACCAGCACTCAGCT
ATATCATATGATGGCCATGCGATCAGAATCACCACTGAAAGCCTACGCCT
CTCCGAGATCTACCCCTACTGCAGAGAGCTACGAATCTTTCCAGGACCTT
ACGTGGACTGGAAAGACTCGGTGCCCCCAATCTCA
UFO10069.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:31:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bin-RA | 2412 | CG18647-RA | 210..1299 | 9..1085 | 4910 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6990831..6991851 | 9..1020 | 4540 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:31:45 has no hits.
UFO10069.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:38:55 Download gff for
UFO10069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 202..1298 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:24:55 Download gff for
UFO10069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 202..1298 | 1..1084 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:07 Download gff for
UFO10069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bin-RA | 202..1298 | 1..1084 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:09:07 Download gff for
UFO10069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6990823..6991864 | 1..1031 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:24:55 Download gff for
UFO10069.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6983923..6984964 | 1..1031 | 97 | | Plus |
