UFO10091.5prime Sequence
1083 bp (957 high quality bases) assembled on 2011-10-19
> UFO10091.5prime
CAGTCGACATGAAAAGTCATTGGATGCCCGTCACCTGCTTACTGCTTGGC
AGTCTCCAGGTTCTATTGGCTTACACCGAAAACGACTTCTTGGTGAACGC
CAATCGCAAAGAACTAACTGATTCCCCTTTGTTTGAATATGATAATGTCA
GAAAGCCCACACCAACCAAGGGATTGTTGTACCCCAGGGATTCGGAGACC
CGTGAAGTGCGGAGCTTGGATGGAATGTGGCAACTGGTTAGGAGTGATCC
ATATGACCCCTTACAGGGAATTAGGGAAAAGTGGTTTATGGATGCCTTGA
GAAAAACCGGAAGGGAGATTATTTCGATGCCAGTGCCTGCCTCCTATAAC
GACATCACTACAGATAACTTACGAGATCACGTTGGAACCGTATGGTATGA
GCGTACTTTTTTTGTGCCGCGCTCCTGGAAGACTATGCAACGCACTTGGT
TGCGATTTAGCAGCGTTCACTATTCGGCCGTGGTATGGATCAACGGAAGG
AACGCCACAAGTCACTCCATTGGCCACCTACCCTTTGAGTCAGAGATCTC
GGGACTGCTCAGCTTTGGCGGCGATAACAGGATCACGGTGATGTGTGACA
ATCGTTTGAGCAACCGCACCATTCCTCAGGGTTCTGTTTACAAGGTGGCT
ACGGATGACGGCACCGTGCCCATCCAGAGTTACACTTTCGATTTTTTTAA
CTACGCGGGAATCCACCGGAGTGTACACTTGTACACGACCCCGCTGCTGC
ACATAAGCGATTTGGAGGTCACCACCCAACTAACTAAAGAAGGATTGGGC
CGCATAGACTACCGCGTGTGGTTGGATGCTAGCAAGGAGGGCCTCCAAAT
CTGCCCATCCAACTTCGGGTGCAACTAAGGACAAAGATGGTCATGTGGCC
GCCCAGCAGATTAACAAGGCGTCTACATGGTACTCTGCTGGTGCCAATGA
ACTCCCTGGTGCCCTACCTAATGCATTCCGATCCCGCTACTGTATATCTC
AATTCAAGCTGTTTGTGGCAGCATGAAGGATTGGAAACCTGCAGGATACC
TACGCTCCAGTGGGCATACGTAGCTTAGTGGAC
UFO10091.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2135-RA | 2331 | CG2135-RA | 91..1179 | 9..1077 | 4895 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 31770774..31771758 | 986..9 | 4550 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:41:10 has no hits.
UFO10091.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:45 Download gff for
UFO10091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2135-RA | 92..1193 | 4..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:35 Download gff for
UFO10091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2135-RA | 87..1188 | 4..1083 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:21 Download gff for
UFO10091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2135-RA | 87..1188 | 4..1083 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:21 Download gff for
UFO10091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 31770661..31771762 | 4..1083 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:35 Download gff for
UFO10091.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27596383..27597484 | 4..1083 | 97 | | Minus |
