Clone UFO10093 Report

Search the DGRC for UFO10093

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:100
Well:93
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcript
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10093.5prime Sequence

1101 bp (953 high quality bases) assembled on 2011-10-19

> UFO10093.5prime
CAGTCGACATGTCACTAGCCGGAGTCCTGACCTTTCAGCAGGCCATATCT
GGAGCTGTGTCACCACAGTATGGCACAGTGGGATCGCTAAATTCCCAGGT
ACCCGCTACCGGTGAAGCCGGAAAGCCGGGAATTGTGGGATCCGATGGCA
TTGGCGGTGGCGGTGGCGGTTTACCTGGCGGATCTTCACACAACTTAAAT
TTGACGGTGGGCCTGGGGTTTCTCGGTGGTTCCAGCACCACTTTGGCTGC
TGTCGCCGAGGTGACTAGTGGACCGGATGGCAATGGCGACTCCACCGACT
CCCCATCTCCGGTCTCCATGATTCCCAGCAATCAGCAAAAGCAGCAGCAG
CAACTGTTGCAGTTGCAACTGCAGCAGGAGCAACAGCATCTGCCCACCCA
TTTGCCCATGAAGCGGGAACGAGGCGTAGGCGAGTCCTCGGGGGCCAGCA
CATCCGGCACCGCCATCGCCGAACTGGCCTCCTCCGTCGTCCTGGCCACC
CAGTCCGGCAAGCCGATGACGGAGCGACAACGCTTAAGGACATCCAGCAT
GCCGGCGGAGAGTAGAAGGCCCCTGCCTGGCGGAGATGCGACGTTCGGCC
ATCCATGCCGGTGATCCGGACATGACCTACTACCGTCTGCGAAGCTTCAG
CATCACCTCCCATGGCATCTGCAATTTGGGCGATTCCCTGAGAAGCCGCA
GGTCACGTTCGATCAACTCCGTGACTTCCACCGGCACCTCAAACAGCGGC
GTGGATCGACACAATAGCAACGCATCGGGGGCATCGGGCGAAGTCATCGA
CGGGGATCCCAATGTTCCAGCCTACAAATTGCCATGCTCGGCGCCTCCGG
AGTGGGCAAGACCACACTGACTTACCAGTTCACACTTCAGATTACATATG
CGCCTACCGACCTGAGTTCTCGATGATGACTACGGACAGAAGACGGTTGT
CCGGTGCTGGTCGAAAACATTGAGACGGATTTAGGAAAATTATTGATCAT
CCGGCATTGCGAGATGTCGACCGGAGGCCCTTCCGGCGCCCACTAACAAC
ATCGCCTTTCTTCGGGTGGTCTACTCTGGATAGAATCGAAACACTTTTCG
C

UFO10093.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42541-RF 8763 CG42541-RF 3267..4346 8..1097 4885 97.5 Plus
CG42541-RE 9704 CG42541-RE 3321..4400 8..1097 4885 97.5 Plus
CG42541-RD 8817 CG42541-RD 3321..4400 8..1097 4885 97.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 3904029..3904590 569..8 2810 100 Minus
X 23542271 X 3901121..3901265 907..765 610 97.9 Minus
X 23542271 X 3901931..3902052 692..571 595 99.2 Minus
X 23542271 X 3901786..3901862 767..691 385 100 Minus
Blast to na_te.dros performed on 2014-11-27 00:41:16 has no hits.

UFO10093.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:46 Download gff for UFO10093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42541-RD 2200..3287 1..1101 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:42 Download gff for UFO10093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42541-RD 3316..4403 1..1101 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:24 Download gff for UFO10093.5prime
Subject Subject Range Query Range Percent Splice Strand
CG42541-RD 3316..4403 1..1101 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:24 Download gff for UFO10093.5prime
Subject Subject Range Query Range Percent Splice Strand
X 3897556..3897647 923..1019 91 <- Minus
X 3901108..3901262 768..922 96 <- Minus
X 3901786..3901857 696..767 100 <- Minus
X 3901927..3902052 570..695 96 <- Minus
X 3904029..3904594 1..569 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:42 Download gff for UFO10093.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 3795960..3796085 570..695 96 <- Minus
arm_X 3791589..3791680 923..1019 91 <- Minus
arm_X 3795141..3795295 768..922 96 <- Minus
arm_X 3795819..3795890 696..767 100 <- Minus
arm_X 3798062..3798627 1..569 99   Minus