UFO10101.5prime Sequence
984 bp (846 high quality bases) assembled on 2011-11-01
> UFO10101.5prime
CAGTCGACATGGAACCGCCGGTGAAGGGCATTATTGGTATTCTGGCCACT
GCTGGATCGTTTTTTGCACTAGGAGCTTACTATCAGCACATCGATGTCAT
GCGAAAGATTCGACGATTGGAGCAACGAAACCCACATGCCTACTTTATCA
GAAGGAAACTGTACGCACTGCTGGGAATTTTCGCTGTGCGCCCTGATAAC
TCAGAATTCGACGTGGATACCGATGACTGCCACAAGCTGGGCGGGATCAT
GAAGTACGGCTTCCCCAGCACCAATGATATCACCATAAATGAGACCTTTG
ACTTTGTGACCTCTTTCGATCGAAGAAACTCTGCGATTCTGTGGATGTGC
GAGCGGGTAGATCTGTCCAATCGCGTCGTCTACGGGGATTCCACATCCGT
GGCTCCAGCTGGAGCATTTGGACAGTCGGAGGCAGCCAGGGTATTTTTCC
TGTCCAACATTAGGCCCTTTCTAAACAGAGGGTTCAATCTCACTGTCTGG
GATCGACTGCTGCAGTACGTCCATGAGATGAGTCAACGACATGGAACCGT
GTATGCCTACACCGGATCAATTTACTTGCCCCGGGAGCTAAAGTCGAACA
GTTGGTTCCTGGAGTTCCAGTCGGAGGAGAGAACCATGGTGGCCGTACCA
CCCATTTCTTCAAGATCCTGGTCATTGATAAAGAAGTTCGCGGGCGATAC
CATTCCCTATGCGGAGGGCCTATGTGATGCCCACCTCTCCGCTGAACAAC
AATGTCGAACTGAAAACGCCTTCTCAGCGATGTCCGGGAAATAGAAAACG
CTACTGGGTCTCCGGTTCTTTGAAGGACTCGACCGCAATTTTGTCAACAC
CCAAGCATCAAATTCATTTGTCCCCTCATAAACGGTCCTTTAACAAATCC
GTTAACGTAGCCGATGGACTAATGGCCTTAAACGAGTCACATTGCCCTCA
CATCAGGTATTTCTCCAAATGAAAGCTTTTCTGA
UFO10101.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl1-RA | 1108 | CG31682-RA | 92..1047 | 9..969 | 4455 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2239475..2240269 | 969..170 | 3440 | 97.9 | Minus |
| 2L | 23513712 | 2L | 2240341..2240502 | 170..9 | 795 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:41:23 has no hits.
UFO10101.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:47 Download gff for
UFO10101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31682-RA | 87..1053 | 1..973 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:46 Download gff for
UFO10101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl1-RA | 87..1053 | 1..973 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:27 Download gff for
UFO10101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl1-RA | 87..1053 | 1..973 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:27 Download gff for
UFO10101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2240341..2240506 | 1..170 | 97 | | Minus |
| 2L | 2239469..2240268 | 171..973 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:46 Download gff for
UFO10101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2239469..2240268 | 171..973 | 97 | <- | Minus |
| arm_2L | 2240341..2240506 | 1..170 | 97 | | Minus |
