UFO10102.5prime Sequence
312 bp (270 high quality bases) assembled on 2011-11-01
> UFO10102.5prime
CAGTCGACATGCGCATGCTTTTTATGATTTTCACAATAGCCGAGCGAAGT
TTCAAGATTCTAGAACTACCCACCACACCAACGCTTCTGCTGCGCCGCCA
GTCCCACAACTACGGCTACGACTACATCAGCCCCACGCACATCGAACTCA
GCCGGGAAGCAACTCGCCTGGTAATTCGCCGTCTGCAGCGCACCGTTCTC
CGCCTGATCCGTGACCCGGACTTCATCTTGTCTGCCGAGGCGAATCCCGA
GATGGATAAGGAGCACCACGAGTCCCCTTTCGCATCGAACCGCAAGGCCG
GTGCCAGCGGCG
UFO10102.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alr-RB | 1362 | CG12534-RB | 245..549 | 8..312 | 1480 | 99 | Plus |
| Alr-RA | 1107 | CG12534-RA | 1..294 | 19..312 | 1425 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19748912..19749216 | 8..312 | 1480 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:41:30 has no hits.
UFO10102.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:47 Download gff for
UFO10102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alr-RA | 1..298 | 15..312 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:50 Download gff for
UFO10102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alr-RB | 171..479 | 1..312 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:30 Download gff for
UFO10102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alr-RB | 241..549 | 1..312 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:30 Download gff for
UFO10102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19748908..19749216 | 1..312 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:50 Download gff for
UFO10102.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19642941..19643249 | 1..312 | 97 | | Plus |
