UFO10103.5prime Sequence
1058 bp (951 high quality bases) assembled on 2011-11-01
> UFO10103.5prime
CAGTCGACATGTTGGCGCTCCTCCGGCCAGCACTGTGGCTGGGAAGCTGC
CTTCGTGGCTATCACATGCATGCCGCCTCTACGCAGCAGCGGGGCGACAC
GTCCTTGGTTCTGGTGGATGAGGCCCGCCGCTTTATCCAGGACTGCCTGC
TACGGGTTGGAGTTTCCCCCTCCAAGGTGCGCTGCATCAGCGAGTTCCTG
GTTGTGGCGGACTATCGAGGAAACTACGGAAGCGGGCTGAATCGCCTGGA
TTACTATCTCAGTGATCTGCAGAGCGGGCATGCCAAGGTGGGCGCAGAGC
CTTCAATAATCAGTGAAACGGTGTCCACCGCCCATGTAAATGGCAATTCC
GCCTTGGGTGTGTTTGTGGGAAACTTTTGTATGGATTTGGCGGTGAAGAA
AGCTGAAGACTCTGGCATCGGTTTCGTAGTGGCCCAGCAATCTCACGACA
TTGGCATGGCCAGCTGGTTTACATTTCGCGCTGCCGGCAAGGGATTAGCC
GGAATCGTGATGTCCAATTCGGCTCCAACGATGATGGGTCCCAACTCAAA
GTCTGCCAGCATTGGCTCCAACTGCTTTGCCTTCTGCGTAAAGGGTGAGG
AGTACCATTTTGTTCTAGACATGGCGACCAGCGTGAAGGATATTGGAGCC
GTGGAATGGGCTTGGGCCAACGATGAGTATATACCGCATGGCTGGGCGGC
CAACGAGGGTGGCTTATCCACCTGTTTTCCCAGCTTGGCCCTTAAAGACA
CCATTACTATTTCCTGCTGGTGGTCACAAAGGCTATTGCCTGTCAGCCGT
GATAGATATTCTATGTGGAGTGCTCTCTGGTGCCCATATGCCCACTCATA
TAACCATGGAACCAGAACCAACCATCGAACTTGGGTCAAGTATTTATTGC
TCTCGATCCAGATTTTTCTTGCCCACTTTTATGGAACGTTTCGATGACTT
TTGTGTCCCATCCAGAATAGCAGCGGCGACGATTCCAAGCCATCCGGCTA
CCTGGCGAACTTGGGAGAGGATGCCATGAACCTACTTGAAGAATTTGCCG
GCTTACCT
UFO10103.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18808-RA | 1354 | CG18808-RA | 79..1126 | 9..1054 | 4765 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:41:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4806366..4807328 | 971..9 | 4490 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:41:36 has no hits.
UFO10103.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:48 Download gff for
UFO10103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 70..1120 | 1..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:55 Download gff for
UFO10103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 70..1120 | 1..1048 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:13:35 Download gff for
UFO10103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18808-RA | 70..1120 | 1..1048 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:13:35 Download gff for
UFO10103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4806287..4807332 | 1..1048 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:55 Download gff for
UFO10103.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4806287..4807332 | 1..1048 | 97 | | Minus |
