UFO10120.5prime Sequence
646 bp (646 high quality bases) assembled on 2011-11-01
> UFO10120.5prime
CAGTCGACATGATTGCAACGAACAGAATGGGATTCCTGGAGCATGACAGC
TGGATTACAGTGGAGCTCCAGCACTCGCTGGCTGCAAACTCGGAAAGTTT
CTCCTTCCGCGGGAATGTGACGATTCCCAGTCTCAACTCTGGTCTGGCCA
ATGTGGAGCAACCAGATCTGAGCACTGCCGATCTGGACTTGCTGAAGAAA
CTGGCCCTTGGAAACGAGTTCTACCGTTTGAAGGCCACGGTGGTGTATTC
AAATGGAGCTAAGGCGCAGTTCATCACTTCCAACAAGGCCTGTCGCCTGC
TGCAAGCCCAATTGAATGACGTGCTTTGGGTGTCGCTCGAACCCTCCGGA
TACGTAACCGGCATCACTGTGTCCCAGGACACGGCCCCGGCCACTATAGA
GTGCACCCAGGAAGACGTGAATAAGCTACTGGAAACGCAATTCAGCACCG
ATGTCCTCATCCGCCACGCTGAACTGGCCCCCGTGCCCGATACTGCTGGC
TTTATTCAGAAGGTGGAGCGGGAGCGCGAGGCCAGGGAGCGCGGGGAGGT
TCGGGATAACCGCGGCTTCTTTGCCAAATACTGGATGTACATCGTTCCGG
TAGTTCTGTTGGTCTTCATTTCGGGAGCCACCAACCAGGACGGTGC
UFO10120.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32441-RD | 902 | CG32441-RD | 125..762 | 9..646 | 3190 | 100 | Plus |
| CG32441-RC | 887 | CG32441-RC | 130..747 | 29..646 | 3090 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21575225..21575610 | 196..581 | 1930 | 100 | Plus |
| 3L | 28110227 | 3L | 21574743..21574911 | 29..197 | 845 | 100 | Plus |
| 3L | 28110227 | 3L | 21575670..21575734 | 582..646 | 325 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:42:49 has no hits.
UFO10120.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:56 Download gff for
UFO10120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RD | 125..762 | 9..646 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:31:48 Download gff for
UFO10120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RD | 125..762 | 9..646 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:15 Download gff for
UFO10120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32441-RD | 125..762 | 9..646 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:15 Download gff for
UFO10120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21574255..21574275 | 9..29 | 100 | -> | Plus |
| 3L | 21574744..21574911 | 30..197 | 100 | -> | Plus |
| 3L | 21575227..21575610 | 198..581 | 100 | -> | Plus |
| 3L | 21575670..21575734 | 582..646 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:31:48 Download gff for
UFO10120.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21567355..21567375 | 9..29 | 100 | -> | Plus |
| arm_3L | 21567844..21568011 | 30..197 | 100 | -> | Plus |
| arm_3L | 21568327..21568710 | 198..581 | 100 | -> | Plus |
| arm_3L | 21568770..21568834 | 582..646 | 100 | | Plus |
