UFO10121.5prime Sequence
961 bp (709 high quality bases) assembled on 2011-11-01
> UFO10121.5prime
CAGTCGACATGTTGGCGAGATGTGTTTTGTTCGTCACTTGGCTGGCGGTT
TTCATTGCGACTGGAAAAAGTGACGATCAGTTGATGAAGCTCCCCGCCTG
CGCCGCCAAACAGGGAGAGTGCGATGATAACGAGGGTCCCGTCTGCGGCA
CCGATGGCCAAACCTATCCCACCAGGTGTCATCTGCTGCGGGCGCAGTGC
GGTGGCCACCAGGTGAGCCTCAAGTACAGCGGCTCCTGCAATGCCTGCCT
GGAGGCGGTGAAATTTGCCCGTCGTCAGCAGGAGCGAGATCCCGGATACT
TTGTGCCCCGATGCAGGAAGGATGGCAACTTTGCGGCTATGCAGTGCTAC
GGGAACAACGGATGCTGGTGCAGCGACAGTCAGGGCAGGCCCATCGCGGA
TGATAACAAGCAATTCCGGCGAAAGGGAAAGCTGCGCTGCAGGGCCAATC
GACGTGACCGACGCCGCCTGGCATCGCATCAGATTGGCTACAATCCGGAT
ACATCTGCGTCCAAAGGCAGTTCGGAGGCAGGATCAACAGCCCACCGGAC
TTGCAGCAAGTCCGATCGGTCGCAAATTCAACACCAACCTGATGAGGATG
TTCCGGAACGAGGCTCAAAGCTTTTTCCCGCCAGCCATTCTCTCTCGGAT
TCCCACATCCTGTGTGGCAGTTCTCCAAGCTGGACACGAATGGCACAATT
TGCTCGATCGTTGGGAGATTCGGGGAGCTGAAGAAGGTACTCAGGCGGAC
CGTTTAACCCTCGTCGTTTGTGAGACGGACCTTTGATAAATACTGTGGAT
TGTAACCAAGGGAGGCCAATCTCCATTGGGTTGGGATAGGAACCGTTCTG
CTTTACCAAAGATGTTTCCCAACCCGATATGGCTGTCCGTAAATCCTTCT
GGCGGAGGCAGTGCAGCCCCCCGCACCCCCCCTTGCCACCCCTCTACAGT
TATTCCCAAAC
UFO10121.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:42:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| magu-RD | 2710 | CG2264-RD | 316..1214 | 9..927 | 3750 | 95.5 | Plus |
| magu-RB | 2838 | CG2264-RB | 444..1342 | 9..927 | 3750 | 95.5 | Plus |
| magu-RA | 2994 | CG2264-RA | 600..1498 | 9..927 | 3750 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:42:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10060686..10061189 | 243..748 | 2165 | 97.8 | Plus |
| 2R | 25286936 | 2R | 10060222..10060382 | 83..243 | 805 | 100 | Plus |
| 2R | 25286936 | 2R | 10057269..10057343 | 9..83 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:42:55 has no hits.
UFO10121.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:56 Download gff for
UFO10121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| magu-RF | 565..1424 | 1..874 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:02 Download gff for
UFO10121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| magu-RA | 593..1455 | 1..879 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:18 Download gff for
UFO10121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| magu-RA | 593..1455 | 1..879 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:18 Download gff for
UFO10121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10057262..10057343 | 1..83 | 96 | -> | Plus |
| 2R | 10060223..10060382 | 84..243 | 100 | -> | Plus |
| 2R | 10060687..10061189 | 244..748 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:02 Download gff for
UFO10121.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5944767..5944848 | 1..83 | 96 | -> | Plus |
| arm_2R | 5947728..5947887 | 84..243 | 100 | -> | Plus |
| arm_2R | 5948192..5948694 | 244..748 | 97 | -> | Plus |
