UFO10126.5prime Sequence
1094 bp (972 high quality bases) assembled on 2011-11-01
> UFO10126.5prime
CAGTCGACATGATGTTCACGGGCACCAATCAGCAGCAGGACACGCGGTTC
AGCGACAAGGAGAAGAAGCTGATGAAGCAAATGAAGTTCGGCGATTGCCT
GAACAAGAGGGTGGATATGTCGAAAGTCAAGCTGGACGTACTGCGTCCGT
GGATCAGCAAGAAGATCACCGACATCCTGCACATCGAGGACGACGTGGTC
GTCGAGTTTGTCTACAATCAGCTGGAGGAGGAGAAGTATCCGTGCCCCAA
GAAAATGCAGATCAATATGACGGGCTTCTTGAACGGCCGAAATGCCCGCC
AGTTTATGGGTGAACTTTGGGCCCTGCTGCTTTCGGCACAGGAAAGCGAT
TCGGGTATACCAGCGGAGTTTATACAGCAGAAAAAGGACGAGATACTCAA
ACGGGAGGAGGAACAGCGGCAGCGGGATCGATCGAGATCCCGTTCGCGTT
CCCGCTCCCAACGAGACAGTTCTAGGCGAGATCGGCAGCGTGACCGCTCC
AAATCCAAGTCCCGCTCCAGATCCCGCTCAATGAAGCCGGCCAACAACAA
CGGTTCGGTGCCCAGTGCCGCACGAGAAGCGGCCGCCAATGCGGCTGCCA
AAATCCGTAAACGCGGCTCCTCCTCCGCCGCGCGTCCCGGCTCCAGGGAG
CGGAGATCCAGCCGACGACCACGTTCTCGTTCACGTTCACGCTCGCGAAC
CGCCGGCAAAAAGACAGGCTCGGTGGAGCCCGCACCCGCCAAGACTGTCA
ACGGCCGCCACTCGACGGACAAGTCCTCGCCGGTACCGCCGGCCTCCAAG
AACAGTCGCGCTCCCGTTCGCATTCCCGGTCGCGATCGCCGCGCAGTCGA
TCTCGATCGCCCAGCGCCAAGCGGTCACGTTCCCGCAGTTTCCCCGCGAC
GCAGTCGCCGACGAGGACGCTCCAGCAGCATATCTTTTGTCGCCGGAGCG
CAACAGGATCAGTTGAGCACCGACGCAACAAGAACAGTTGTGCAAACAAG
CCGGCAAATATCGCACATTCGCGGGACTCGCTAAGTTTCATGAAGGCGGT
TACGATTCGAGCAGCAGTTGGCGTGGCGGAAGTGTCGTCAGTGC
UFO10126.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SRm160-RA | 3862 | CG11274-RA | 433..1519 | 9..1089 | 4865 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13037423..13038392 | 20..988 | 4595 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:43:02 has no hits.
UFO10126.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:57 Download gff for
UFO10126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SRm160-RA | 420..1457 | 1..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:06 Download gff for
UFO10126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SRm160-RA | 425..1462 | 1..1037 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:22 Download gff for
UFO10126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SRm160-RA | 425..1462 | 1..1037 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:22 Download gff for
UFO10126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13037423..13038400 | 20..997 | 99 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:06 Download gff for
UFO10126.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13030523..13031500 | 20..997 | 99 | <- | Plus |
