UFO10129.5prime Sequence
1057 bp (962 high quality bases) assembled on 2011-11-01
> UFO10129.5prime
CAGTCGACATGCACGTGGAGGAGCTGAGAGCCAGCCTGCAGAGCTTTGGA
TGGCCGGATTATTTGGTCTTTTGCCTGATGTTGGCCATTTGCGCCGTTAT
CGGTATATATTTTTGCCTGCAACTGCGCTTAGAGTCCAGGAAACAAAAGG
CCAATGGCTCAGAGGAGGCGGCGAGTAGTGCTGCCTCGTATTTGGTTGGT
GGCAGGCAGATGAAGATCTTTCCCATAACCATGTCACTGATATCCAGCTT
TATATCTGGAATTACACTTTTGGGTACTCCCACAGAGGTTTATCTTTATG
GTGCTCAGTACATGTACATTATGGGATCGCTGGTTTTAATGGGCTTCTGC
ATGTACTACTTCTTCTTGCCGGTCTTTCACGAACTCAATTTGATATCCAC
TTATAAGTATTTGGAACAGCGATATAACCGAAGTTTAAGGCTTTTCGGAT
CTGTCATGTTTATTGTGGCTTCGCTACTTTGGCTTCCAATTGTGATTTAT
GTACCGGCTATAGCATTCAATCAGGCCACTGGAGTGAACATCCATATAGT
GACGCCCATTGTGTGTGTGGTTTGCATTTTCTATACTTGCATTGGAGGTT
TGAAGGCGGTGGTTTGGACGGATGTCATCCAAACGTTGATCATGTTCGGT
GCGATGGCTTTGGTTTTGATTAAGGGAACCCTGGATATCGGCGGACCTGG
AGTTGTGTGGCAGAAGGCCCAAGAAACAGCTCGATTGGAAAGTACCCAAT
TTTAGTGCGGATCTAAGTGAGCGGTATACCTTTTATTCCCTGGTTTTGGG
CGGTGTAGCTCATTGGCTCAAGTCAAATGCAATTAGTCAGATATGATCCA
GAGATATTTATCGCTACCCACGCTTCGTGATGCACGGATTGCAATATGGA
CATTTATCGCTGGTGTTTTGGCTTTTTGATGATCTGCGGATATACGGTCT
TTTGATCTATGCCACTATCTCATGTGATCTTTGGAACGAAGGTGGACAAA
AGAACGATCACCTTGCCACTTGGTATGACGTGGACTCATTCGATACCGAG
ATATTGT
UFO10129.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9657-RB | 2557 | CG9657-RB | 132..1154 | 9..1021 | 4755 | 98.3 | Plus |
| CG9657-RA | 2054 | CG9657-RA | 132..1154 | 9..1021 | 4755 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7420119..7420613 | 473..965 | 2280 | 99.2 | Plus |
| X | 23542271 | X | 7418725..7418963 | 9..247 | 1195 | 100 | Plus |
| X | 23542271 | X | 7419771..7419933 | 245..407 | 815 | 100 | Plus |
| X | 23542271 | X | 7419990..7420057 | 406..473 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:43:21 has no hits.
UFO10129.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:39:59 Download gff for
UFO10129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 131..1120 | 9..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:17 Download gff for
UFO10129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 132..1121 | 9..991 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:33 Download gff for
UFO10129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9657-RA | 132..1121 | 9..991 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:33 Download gff for
UFO10129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7418725..7418963 | 9..247 | 100 | -> | Plus |
| X | 7419774..7419933 | 248..407 | 100 | -> | Plus |
| X | 7419992..7420057 | 408..473 | 100 | -> | Plus |
| X | 7420120..7420644 | 474..991 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:17 Download gff for
UFO10129.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7312758..7312996 | 9..247 | 100 | -> | Plus |
| arm_X | 7313807..7313966 | 248..407 | 100 | -> | Plus |
| arm_X | 7314025..7314090 | 408..473 | 100 | -> | Plus |
| arm_X | 7314153..7314677 | 474..991 | 98 | | Plus |
