UFO10132.5prime Sequence
1086 bp (954 high quality bases) assembled on 2011-11-01
> UFO10132.5prime
CAGTCGACATGCTAGACCTCGTTCACAAAGCCACGCTGCATAGCATGGTC
TGTCAGGCAATCCTAGTGTTAATCTGTTTGCTATGCTACGGATGCGGTGG
CCTCAGTGGAGCGAAGTTTGTCTTCGATGATACGGTGGCCATCGTCAAGA
ACCGGGATGTCAACTCACTGCCCACCAACTGGACGGCGATCTTCACGCAC
GACTTCTGGGGTGCTTCCTTGCTCAGTTCCGATTCCCACAAATCATTTCG
GCCACTGACCACCCTGATGTTCCATTGCGAGTATGCCCTTCTGGGGCTAA
GTGCCGCCCACATGAAGTTCCTAAACCTCCTGCTACACTGCGTCAACACG
CTGCTCATGTGGCGATTGATTCGCTCTCTCTATGTTCCGGAGGTCAGCAC
GGCAAGATGGGCCATCCTCTCCGCTGCTCTATTTGCCGCCCATCCAATTC
ACACAGAGGCGGTTTCTGGTGTGGTTGGAAGGGCCGAGCTCATGTTCGGC
ATGATTCACTTGTTGTGTCTTCTGCTGACCGTGGCCAATACCGGAAGACT
TGGTCCACAGACTGGCGGTCTAATCATGCTGCTCACCGCTGTGGGAATGC
TGTTCAAGGAGTCCGCTGTGACCATCCCCATGTCGTGTGTACTATTGGAT
TACTTTCAAAACGGCTACTATCATCTGCGATTCAAGGATCAGTGGAGTCT
TTTGCGCACCCGGATCAGCTACTTGTTCTCCTTGCTGGGTACCTTGGGTC
TGCTGACGGCTCGCCTTTGGTGGCAGGACTTTGAGACGCCTACCTTTAAG
GAAGTTGACAACCCCGTTGCGCACAATGAGCACGTGCTGACCCGTGGGCT
CCTCCCAGCAGTATCTGCTGGTCATGAACATCTGGCTGATGCTGTGCCCC
ACTGGCTATGCTACGACTGGGCATTGGGTTGCGTCAAGTTGTGACCACAT
CTGGGATCTGAGACTGCAGGCGTCTTCGATCTACTCCATCGTATGGTGGC
CTCTGATGACTTCGACGCTGCCCGGAATGATGTTAGCTCTGGGTTATGAT
CGTTCCGGTCTGCGCGTCGGGCATACATTGCGTAGA
UFO10132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5038-RA | 2702 | CG5038-RA | 127..1216 | 9..1085 | 4920 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15351351..15352395 | 9..1045 | 4650 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:43:55 has no hits.
UFO10132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:02 Download gff for
UFO10132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5038-RA | 121..1190 | 1..1063 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:39 Download gff for
UFO10132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5038-RA | 123..1192 | 1..1063 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:53 Download gff for
UFO10132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5038-RA | 123..1192 | 1..1063 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:53 Download gff for
UFO10132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15351347..15352430 | 1..1076 | 97 | <- | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:39 Download gff for
UFO10132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11177069..11178152 | 1..1076 | 97 | <- | Plus |
