Clone UFO10134 Report

Search the DGRC for UFO10134

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:101
Well:34
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCrag-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO10134.5prime Sequence

367 bp (212 high quality bases) assembled on 2011-11-01

> UFO10134.5prime
CAGTCGACATGGAGGAAAAGCGCATCGCCGACTACTTTGTGGTGGCCGGA
ATGCCGGAGAATCCGCAGCTGCTGCAGGAGAACAGCTTCAATGACTCGGG
AAGATTGAGAGCGGCCACCACCATCGAACCGATCACGGACATCGGGCGTC
TATTTCCCGCTGCTGGGCGAGGAGGTGCCCCGAGGGATACGAGATCCTCC
TCGCACACGCCCCCGGGTCTACAGGCGAACCTTCATCAAGGGATCGGTCC
GGCACCACCGACTGCTACATTTAACTCCGGGGGGGCAAGGATTCCCCCCC
CCGCTGGTGGAAATAGGAATTCCGGTACAAGGGCCCCCAACGGATCTTGT
CGGAAGGGGAAATCCTT

UFO10134.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:43:36
Subject Length Description Subject Range Query Range Score Percent Strand
Crag-RD 7001 CG12737-RD 577..925 8..364 1265 91.6 Plus
Crag-RB 6115 CG12737-RB 577..925 8..364 1265 91.6 Plus
Crag-RA 6196 CG12737-RA 577..925 8..364 1265 91.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:43:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8593495..8593797 8..317 1055 93.9 Plus
Blast to na_te.dros performed on 2014-11-27 00:43:35 has no hits.

UFO10134.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:00 Download gff for UFO10134.5prime
Subject Subject Range Query Range Percent Splice Strand
Crag-RA 549..874 1..335 91   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:32:25 Download gff for UFO10134.5prime
Subject Subject Range Query Range Percent Splice Strand
Crag-RA 571..896 1..335 91   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:14:41 Download gff for UFO10134.5prime
Subject Subject Range Query Range Percent Splice Strand
Crag-RA 571..896 1..335 91   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:14:41 Download gff for UFO10134.5prime
Subject Subject Range Query Range Percent Splice Strand
X 8593489..8593774 1..292 94   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:32:25 Download gff for UFO10134.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 8487522..8487807 1..292 94   Plus