UFO10204.5prime Sequence
1071 bp (785 high quality bases) assembled on 2011-11-10
> UFO10204.5prime
CAGTCGACATGACCTAGGTATCAGGGACGAAGGCAAAAGACGATGGCGAG
CCAGCCACTAAGCGCGAACGCAAGGAGATGCATTCGCACAAGAAAGATCG
CAGGGAGCGATTGGAACGCATGGAGCGCATGGACCGCAGGGACCGCAGAG
ACCGCAGAGAACGCAGGGACCGCAAGGACCGCAAGGACCGCAAGGACCGC
AAAGAGCCAGCCAGAGGCCCCTCCTCCCGGATGAGGAACATCTCACCAAT
TCACTCGAATGCTTCGGAGAGCACTGAATCAGACTGCAGCGACTCCAGCT
ACTCGGACTCGAGCTACAGCACCTCTGGATCGTCCAGCTGCACAAGCTTT
TTGAGCTCCACCAGCAGCAGCTACTCGTCGAGCGACAGCGAGCCAGAGCC
AGAAGGATCCGTCAAAAAGTTTGAGCGCACCAAGCACTCGTGTTGCCATT
ACCGACACCATCGTCGCCATAGGCGCCACCAAAACCCTCGTCATTCGCAC
CGTCGCCGGCACGTCACCCGTTGCCATCACTCGAATCACGGACGCTTTTC
CAAGCGTTTGGCTAAAAAGAGTCGTCGTGGCATATCCCGCCGCCAAGGGA
GCTATCACGGTTAAGGAGGAGGTTGTCGAAAAAATTTCTCCTGCTTCAGC
CCCTGGGGTCATTCAGATACCGGCACCCATTCCGCTGCCCGTGCCGGCAC
CCATTCCGGCTGTCCTGTCTGTTTCGGAGGCACAACCGCGTTCCACTCCC
GTTCGCAATCGCACTCCCCATCTCCATAGCCATTCCTGGCTCCCATAAAC
AATCCCCCACCCGCAACCCGTTCCGGCCCCTGTTCCGGTACCATTTCTTG
CTCCGATCCGCCATTGCCAACCTCCTATGAGGGAATCCAACCTGCGGTGG
TATTTGGACCCTCATGTTTTCGTAATGCCACCTCCACCTCCCAAAACTTC
CCCCTCGGCCGCCACAGTTTCTTTCCGCACCAACCCAGTCTTTCATTCCT
GTCCTAGCCCTTATACCATTACCAAAGAACCGATTGCCAACGGCCCCCTG
GTTTTGGCCGAACCCAATTTC
UFO10204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:44:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34334-RA | 2556 | CG34334-RA | 205..1243 | 9..1069 | 4190 | 94.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:44:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22873016..22873861 | 9..858 | 3880 | 98.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:44:47 has no hits.
UFO10204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-11-15 11:40:07 Download gff for
UFO10204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34334-RA | 199..1147 | 3..964 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:33:15 Download gff for
UFO10204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34334-RA | 199..1147 | 3..964 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:23 Download gff for
UFO10204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34334-RA | 199..1147 | 3..964 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:23 Download gff for
UFO10204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22873010..22873958 | 3..964 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:33:15 Download gff for
UFO10204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22274846..22275794 | 3..964 | 96 | == | Plus |
